Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_007244797.3 |
| length | 3723 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 3 |
| gene id | gdnf |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035916.1 |
| NCBI id | CM008319.1 |
| chromosome length | 36262418 |
| location | 4118034 ~ 4130482 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0021784 | postganglionic parasympathetic fiber development | biological_process |
| GO:0048484 | enteric nervous system development | biological_process |
| GO:0048485 | sympathetic nervous system development | biological_process |
| GO:0072107 | positive regulation of ureteric bud formation | biological_process |
| GO:0001755 | neural crest cell migration | biological_process |
| GO:0030432 | peristalsis | biological_process |
| GO:0048255 | mRNA stabilization | biological_process |
| GO:0051584 | regulation of dopamine uptake involved in synaptic transmission | biological_process |
| GO:0032770 | positive regulation of monooxygenase activity | biological_process |
| GO:0045944 | positive regulation of transcription by RNA polymerase II | biological_process |
| GO:0090190 | positive regulation of branching involved in ureteric bud morphogenesis | biological_process |
| GO:0001656 | metanephros development | biological_process |
| GO:0031175 | neuron projection development | biological_process |
| GO:0043524 | negative regulation of neuron apoptotic process | biological_process |
| GO:0005576 | extracellular region | cellular_component |
| GO:0042803 | protein homodimerization activity | molecular_function |
| GO:0008083 | growth factor activity | molecular_function |
| id | description |
|---|---|
| K05452 | GDNF; glial cell derived neurotrophic factor |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU234475 | lncRNA | upstream | 71690 | 4046083 ~ 4046344 (+) | True | G173182 |
| TU234401 | lncRNA | upstream | 76074 | 4008213 ~ 4041960 (+) | True | G173121 |
| TU234399 | lncRNA | upstream | 112377 | 3958740 ~ 4005657 (+) | True | G173119 |
| TU234358 | lncRNA | upstream | 255840 | 3861105 ~ 3862194 (+) | True | G173090 |
| TU234354 | lncRNA | upstream | 378301 | 3715983 ~ 3739733 (+) | False | unc5c |
| TU234530 | lncRNA | downstream | 118403 | 4248872 ~ 4249963 (+) | True | G173232 |
| TU234562 | lncRNA | downstream | 183375 | 4313844 ~ 4316472 (+) | True | G173259 |
| TU234575 | lncRNA | downstream | 262605 | 4393074 ~ 4400580 (+) | True | G173268 |
| TU234579 | lncRNA | downstream | 271567 | 4402036 ~ 4416212 (+) | True | G173270 |
| TU234581 | lncRNA | downstream | 271567 | 4402036 ~ 4476650 (+) | False | G173270 |
| XM_022680899.1 | mRNA | upstream | 378298 | 3465133 ~ 3739736 (+) | True | unc5c |
| XM_022680900.1 | mRNA | upstream | 378298 | 3465133 ~ 3739736 (+) | False | unc5c |
| XM_022680893.1 | mRNA | upstream | 928334 | 3178378 ~ 3189700 (+) | True | LOC103029394 |
| XM_022680894.1 | mRNA | upstream | 928334 | 3178378 ~ 3189700 (+) | False | LOC103029394 |
| XM_007250237.3 | mRNA | upstream | 944478 | 3170196 ~ 3173556 (+) | True | LOC103031084 |
| XM_007244825.2 | mRNA | downstream | 111699 | 4242168 ~ 4244029 (+) | True | LOC103042678 |
| XM_022681516.1 | mRNA | downstream | 202404 | 4332873 ~ 4337695 (+) | True | LOC111195096 |
| XM_007244788.3 | mRNA | downstream | 224465 | 4354934 ~ 4379352 (+) | True | ranbp3l |
| XM_022680913.1 | mRNA | downstream | 224465 | 4354934 ~ 4379352 (+) | False | ranbp3l |
| XM_007244787.3 | mRNA | downstream | 252662 | 4383131 ~ 4389029 (+) | True | LOC103029159 |
| TU234387 | other | upstream | 186043 | 3908942 ~ 3931991 (+) | True | G173111 |
| TU234364 | other | upstream | 374829 | 3740302 ~ 3743205 (+) | True | G173094 |
| TU234126 | other | upstream | 1391964 | 2718609 ~ 2726070 (+) | False | LOC103031931 |
| TU233936 | other | upstream | 2120672 | 1994708 ~ 1997362 (+) | True | G172770 |
| TU233877 | other | upstream | 2262280 | 1853282 ~ 1855754 (+) | True | G172725 |
| TU234776 | other | downstream | 613100 | 4743569 ~ 4744249 (+) | True | G173397 |
| TU234820 | other | downstream | 670160 | 4800629 ~ 4867919 (+) | False | ptbp3 |
| TU234823 | other | downstream | 670160 | 4800629 ~ 4869176 (+) | False | ptbp3 |
| TU234827 | other | downstream | 706245 | 4836714 ~ 4903645 (+) | False | ptbp3 |
| TU234946 | other | downstream | 1053022 | 5183491 ~ 5183777 (+) | True | G173501 |
