Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU234591 |
| length | 598 |
| lncRNA type | read_through |
| GC content | 0.31 |
| exon number | 2 |
| gene id | G173278 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035916.1 |
| NCBI id | CM008319.1 |
| chromosome length | 36262418 |
| location | 4452869 ~ 4490753 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0005212 | structural constituent of eye lens | molecular_function |
| id | description |
|---|---|
| ko04744 | Phototransduction |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU234579 | lncRNA | upstream | 36657 | 4402036 ~ 4416212 (+) | True | G173270 |
| TU234580 | lncRNA | upstream | 36657 | 4411888 ~ 4416212 (+) | False | G173270 |
| TU234583 | lncRNA | upstream | 42090 | 4408952 ~ 4410779 (+) | True | G173272 |
| TU234575 | lncRNA | upstream | 52289 | 4393074 ~ 4400580 (+) | True | G173268 |
| TU234562 | lncRNA | upstream | 136397 | 4313844 ~ 4316472 (+) | True | G173259 |
| TU234607 | lncRNA | downstream | 15838 | 4506591 ~ 4507032 (+) | True | G173288 |
| TU234612 | lncRNA | downstream | 77315 | 4568068 ~ 4571221 (+) | True | G173292 |
| TU234747 | lncRNA | downstream | 202092 | 4692845 ~ 4693060 (+) | True | G173380 |
| TU234750 | lncRNA | downstream | 219358 | 4710111 ~ 4711181 (+) | True | G173383 |
| TU234757 | lncRNA | downstream | 221308 | 4712061 ~ 4775385 (+) | True | G173386 |
| XM_022680914.1 | mRNA | upstream | 8839 | 4438040 ~ 4444030 (+) | False | LOC103026990 |
| XM_022680915.1 | mRNA | upstream | 8839 | 4438040 ~ 4444030 (+) | False | LOC103026990 |
| XM_007244779.3 | mRNA | upstream | 8839 | 4438040 ~ 4444030 (+) | True | LOC103026990 |
| XM_007244787.3 | mRNA | upstream | 63840 | 4383131 ~ 4389029 (+) | True | LOC103029159 |
| XM_007244788.3 | mRNA | upstream | 73517 | 4354934 ~ 4379352 (+) | True | ranbp3l |
| XM_022680918.1 | mRNA | downstream | 12365 | 4503118 ~ 4525930 (+) | False | LOC103024425 |
| XM_022680917.1 | mRNA | downstream | 12367 | 4503120 ~ 4525930 (+) | False | LOC103024425 |
| XM_022680916.1 | mRNA | downstream | 12368 | 4503121 ~ 4525930 (+) | True | LOC103024425 |
| XM_007244770.3 | mRNA | downstream | 12372 | 4503125 ~ 4525930 (+) | False | LOC103024425 |
| XM_022680919.1 | mRNA | downstream | 12372 | 4503125 ~ 4525930 (+) | False | LOC103024425 |
| TU234387 | other | upstream | 520878 | 3908942 ~ 3931991 (+) | True | G173111 |
| TU234364 | other | upstream | 709664 | 3740302 ~ 3743205 (+) | True | G173094 |
| TU234126 | other | upstream | 1726799 | 2718609 ~ 2726070 (+) | False | LOC103031931 |
| TU233936 | other | upstream | 2455507 | 1994708 ~ 1997362 (+) | True | G172770 |
| TU233877 | other | upstream | 2597115 | 1853282 ~ 1855754 (+) | True | G172725 |
| TU234776 | other | downstream | 252816 | 4743569 ~ 4744249 (+) | True | G173397 |
| TU234820 | other | downstream | 309876 | 4800629 ~ 4867919 (+) | False | ptbp3 |
| TU234823 | other | downstream | 309876 | 4800629 ~ 4869176 (+) | False | ptbp3 |
| TU234827 | other | downstream | 345961 | 4836714 ~ 4903645 (+) | False | ptbp3 |
| TU234946 | other | downstream | 692738 | 5183491 ~ 5183777 (+) | True | G173501 |
