Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU237304 |
| length | 887 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 3 |
| gene id | LOC103027177 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035916.1 |
| NCBI id | CM008319.1 |
| chromosome length | 36262418 |
| location | 12191356 ~ 12209449 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_002651428.1 | lncRNA | upstream | 3624 | 12187243 ~ 12189381 (+) | True | LOC111195036 |
| XR_002651429.1 | lncRNA | upstream | 3624 | 12187243 ~ 12189381 (+) | False | LOC111195036 |
| TU237257 | lncRNA | upstream | 123683 | 12065278 ~ 12069322 (+) | True | G175201 |
| TU237223 | lncRNA | upstream | 155194 | 11983263 ~ 12037811 (+) | True | G175169 |
| TU237213 | lncRNA | upstream | 243236 | 11948808 ~ 11949769 (+) | True | G175160 |
| XR_002651432.1 | lncRNA | downstream | 9746 | 12214700 ~ 12217838 (+) | True | LOC111195040 |
| TU237319 | lncRNA | downstream | 14292 | 12219246 ~ 12219689 (+) | True | G175237 |
| TU237332 | lncRNA | downstream | 51640 | 12256594 ~ 12259326 (+) | False | G175249 |
| TU237331 | lncRNA | downstream | 54034 | 12258988 ~ 12260820 (+) | True | G175249 |
| TU237333 | lncRNA | downstream | 91838 | 12296792 ~ 12297319 (+) | True | G175250 |
| XM_007242409.3 | mRNA | upstream | 218 | 12191356 ~ 12192787 (+) | False | LOC103027177 |
| XM_007241259.3 | mRNA | upstream | 41955 | 12144051 ~ 12151050 (+) | True | cnih2 |
| XM_022681537.1 | mRNA | upstream | 97716 | 12090628 ~ 12095289 (+) | True | LOC111195107 |
| XM_015603867.2 | mRNA | upstream | 199781 | 11988169 ~ 11993224 (+) | True | LOC107197312 |
| XM_022681061.1 | mRNA | upstream | 253908 | 11935660 ~ 11939097 (+) | True | LOC111195033 |
| XM_022681538.1 | mRNA | downstream | 109778 | 12314732 ~ 12316734 (+) | True | LOC111195108 |
| XM_007238996.3 | mRNA | downstream | 319187 | 12524141 ~ 12540201 (+) | False | rnft1 |
| XM_015602943.2 | mRNA | downstream | 319187 | 12524141 ~ 12540201 (+) | False | rnft1 |
| XM_007238997.3 | mRNA | downstream | 319187 | 12524141 ~ 12539574 (+) | False | rnft1 |
| XM_022681073.1 | mRNA | downstream | 468924 | 12673878 ~ 12692133 (+) | True | ptrh2 |
| TU237301 | other | upstream | 254 | 12191390 ~ 12192751 (+) | False | LOC103027177 |
| TU237151 | other | upstream | 279549 | 11908872 ~ 11913456 (+) | True | G175108 |
| TU237152 | other | upstream | 279549 | 11908872 ~ 11913456 (+) | False | G175108 |
| TU237153 | other | upstream | 279549 | 11908872 ~ 11913456 (+) | False | G175108 |
| TU236978 | other | upstream | 756475 | 11429871 ~ 11436530 (+) | True | G174994 |
| TU237508 | other | downstream | 534549 | 12739503 ~ 12745053 (+) | True | G175379 |
| TU238049 | other | downstream | 1115830 | 13320784 ~ 13327641 (+) | False | LOC103028411 |
| TU238092 | other | downstream | 1184372 | 13389326 ~ 13418416 (+) | True | LOC111195048 |
| TU238094 | other | downstream | 1206156 | 13411110 ~ 13418416 (+) | False | LOC111195048 |
| TU238204 | other | downstream | 1474405 | 13679359 ~ 13685563 (+) | True | G175900 |
