Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU237331 |
| length | 850 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 4 |
| gene id | G175249 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035916.1 |
| NCBI id | CM008319.1 |
| chromosome length | 36262418 |
| location | 12256594 ~ 12260820 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU237319 | lncRNA | upstream | 39299 | 12219246 ~ 12219689 (+) | True | G175237 |
| XR_002651432.1 | lncRNA | upstream | 41150 | 12214700 ~ 12217838 (+) | True | LOC111195040 |
| TU237307 | lncRNA | upstream | 53945 | 12193005 ~ 12205043 (+) | False | LOC103027177 |
| TU237310 | lncRNA | upstream | 53945 | 12193005 ~ 12205043 (+) | False | LOC103027177 |
| TU237306 | lncRNA | upstream | 54034 | 12193005 ~ 12204954 (+) | False | LOC103027177 |
| TU237333 | lncRNA | downstream | 35972 | 12296792 ~ 12297319 (+) | True | G175250 |
| TU237359 | lncRNA | downstream | 59130 | 12319950 ~ 12326872 (+) | True | G175272 |
| TU237367 | lncRNA | downstream | 77993 | 12338813 ~ 12365939 (+) | True | G175277 |
| TU237374 | lncRNA | downstream | 86678 | 12347498 ~ 12348188 (+) | True | G175284 |
| TU237379 | lncRNA | downstream | 91780 | 12352600 ~ 12353486 (+) | True | G175288 |
| XM_007242409.3 | mRNA | upstream | 66201 | 12191356 ~ 12192787 (+) | False | LOC103027177 |
| XM_007241259.3 | mRNA | upstream | 107938 | 12144051 ~ 12151050 (+) | True | cnih2 |
| XM_022681537.1 | mRNA | upstream | 163699 | 12090628 ~ 12095289 (+) | True | LOC111195107 |
| XM_015603867.2 | mRNA | upstream | 265764 | 11988169 ~ 11993224 (+) | True | LOC107197312 |
| XM_022681061.1 | mRNA | upstream | 319891 | 11935660 ~ 11939097 (+) | True | LOC111195033 |
| XM_022681538.1 | mRNA | downstream | 53912 | 12314732 ~ 12316734 (+) | True | LOC111195108 |
| XM_007238996.3 | mRNA | downstream | 263321 | 12524141 ~ 12540201 (+) | False | rnft1 |
| XM_015602943.2 | mRNA | downstream | 263321 | 12524141 ~ 12540201 (+) | False | rnft1 |
| XM_007238997.3 | mRNA | downstream | 263321 | 12524141 ~ 12539574 (+) | False | rnft1 |
| XM_022681073.1 | mRNA | downstream | 413058 | 12673878 ~ 12692133 (+) | True | ptrh2 |
| TU237308 | other | upstream | 49539 | 12191390 ~ 12209449 (+) | True | LOC103027177 |
| TU237301 | other | upstream | 66237 | 12191390 ~ 12192751 (+) | False | LOC103027177 |
| TU237151 | other | upstream | 345532 | 11908872 ~ 11913456 (+) | True | G175108 |
| TU237508 | other | downstream | 478683 | 12739503 ~ 12745053 (+) | True | G175379 |
| TU238049 | other | downstream | 1059964 | 13320784 ~ 13327641 (+) | False | LOC103028411 |
| TU238092 | other | downstream | 1128506 | 13389326 ~ 13418416 (+) | True | LOC111195048 |
| TU238094 | other | downstream | 1150290 | 13411110 ~ 13418416 (+) | False | LOC111195048 |
| TU238204 | other | downstream | 1418539 | 13679359 ~ 13685563 (+) | True | G175900 |
