Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU237445 |
| length | 329 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 1 |
| gene id | G175340 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035916.1 |
| NCBI id | CM008319.1 |
| chromosome length | 36262418 |
| location | 12565091 ~ 12565419 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU237430 | lncRNA | upstream | 24904 | 12535218 ~ 12540187 (+) | True | rnft1 |
| TU237403 | lncRNA | upstream | 162737 | 12395413 ~ 12402354 (+) | True | G175305 |
| TU237367 | lncRNA | upstream | 199152 | 12338813 ~ 12365939 (+) | True | G175277 |
| TU237379 | lncRNA | upstream | 211605 | 12352600 ~ 12353486 (+) | True | G175288 |
| TU237374 | lncRNA | upstream | 216903 | 12347498 ~ 12348188 (+) | True | G175284 |
| TU237461 | lncRNA | downstream | 20512 | 12585931 ~ 12592035 (+) | True | G175348 |
| TU237462 | lncRNA | downstream | 21829 | 12587248 ~ 12588223 (+) | False | G175348 |
| TU237464 | lncRNA | downstream | 21829 | 12587248 ~ 12588223 (+) | False | G175348 |
| TU237457 | lncRNA | downstream | 22434 | 12587853 ~ 12592035 (+) | False | G175348 |
| TU237459 | lncRNA | downstream | 22434 | 12587853 ~ 12590188 (+) | False | G175348 |
| XM_007238996.3 | mRNA | upstream | 24890 | 12524141 ~ 12540201 (+) | False | rnft1 |
| XM_015602943.2 | mRNA | upstream | 24890 | 12524141 ~ 12540201 (+) | False | rnft1 |
| XM_007238997.3 | mRNA | upstream | 25517 | 12524141 ~ 12539574 (+) | False | rnft1 |
| XM_022681538.1 | mRNA | upstream | 248357 | 12314732 ~ 12316734 (+) | True | LOC111195108 |
| XM_007242409.3 | mRNA | upstream | 372304 | 12191356 ~ 12192787 (+) | False | LOC103027177 |
| XM_022681073.1 | mRNA | downstream | 108459 | 12673878 ~ 12692133 (+) | True | ptrh2 |
| XM_007235407.2 | mRNA | downstream | 225804 | 12791223 ~ 12794193 (+) | True | LOC103039534 |
| XM_015601931.2 | mRNA | downstream | 230697 | 12796116 ~ 12809169 (+) | True | katnal1 |
| XM_007235408.3 | mRNA | downstream | 230698 | 12796117 ~ 12809169 (+) | False | katnal1 |
| XM_015601932.2 | mRNA | downstream | 230733 | 12796152 ~ 12809169 (+) | False | katnal1 |
| TU237308 | other | upstream | 355642 | 12191390 ~ 12209449 (+) | True | LOC103027177 |
| TU237301 | other | upstream | 372340 | 12191390 ~ 12192751 (+) | False | LOC103027177 |
| TU237151 | other | upstream | 651635 | 11908872 ~ 11913456 (+) | True | G175108 |
| TU237508 | other | downstream | 174084 | 12739503 ~ 12745053 (+) | True | G175379 |
| TU238049 | other | downstream | 755365 | 13320784 ~ 13327641 (+) | False | LOC103028411 |
| TU238092 | other | downstream | 823907 | 13389326 ~ 13418416 (+) | True | LOC111195048 |
| TU238094 | other | downstream | 845691 | 13411110 ~ 13418416 (+) | False | LOC111195048 |
| TU238204 | other | downstream | 1113940 | 13679359 ~ 13685563 (+) | True | G175900 |
