Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU237465 |
| length | 452 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 3 |
| gene id | G175348 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035916.1 |
| NCBI id | CM008319.1 |
| chromosome length | 36262418 |
| location | 12585931 ~ 12592035 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU237445 | lncRNA | upstream | 22434 | 12565091 ~ 12565419 (+) | True | G175340 |
| TU237430 | lncRNA | upstream | 47666 | 12535218 ~ 12540187 (+) | True | rnft1 |
| TU237403 | lncRNA | upstream | 185499 | 12395413 ~ 12402354 (+) | True | G175305 |
| TU237379 | lncRNA | upstream | 234367 | 12352600 ~ 12353486 (+) | True | G175288 |
| TU237374 | lncRNA | upstream | 239665 | 12347498 ~ 12348188 (+) | True | G175284 |
| TU237468 | lncRNA | downstream | 2189 | 12594224 ~ 12594628 (+) | True | G175350 |
| TU237469 | lncRNA | downstream | 4603 | 12596638 ~ 12596837 (+) | True | G175351 |
| TU237488 | lncRNA | downstream | 41645 | 12633680 ~ 12635779 (+) | True | LOC111195043 |
| XR_002651436.1 | lncRNA | downstream | 41724 | 12633759 ~ 12635793 (+) | False | LOC111195043 |
| TU237490 | lncRNA | downstream | 67435 | 12659470 ~ 12660283 (+) | True | G175368 |
| XM_007238996.3 | mRNA | upstream | 47652 | 12524141 ~ 12540201 (+) | False | rnft1 |
| XM_015602943.2 | mRNA | upstream | 47652 | 12524141 ~ 12540201 (+) | False | rnft1 |
| XM_007238997.3 | mRNA | upstream | 48279 | 12524141 ~ 12539574 (+) | False | rnft1 |
| XM_022681538.1 | mRNA | upstream | 271119 | 12314732 ~ 12316734 (+) | True | LOC111195108 |
| XM_007242409.3 | mRNA | upstream | 395066 | 12191356 ~ 12192787 (+) | False | LOC103027177 |
| XM_022681073.1 | mRNA | downstream | 81843 | 12673878 ~ 12692133 (+) | True | ptrh2 |
| XM_007235407.2 | mRNA | downstream | 199188 | 12791223 ~ 12794193 (+) | True | LOC103039534 |
| XM_015601931.2 | mRNA | downstream | 204081 | 12796116 ~ 12809169 (+) | True | katnal1 |
| XM_007235408.3 | mRNA | downstream | 204082 | 12796117 ~ 12809169 (+) | False | katnal1 |
| XM_015601932.2 | mRNA | downstream | 204117 | 12796152 ~ 12809169 (+) | False | katnal1 |
| TU237308 | other | upstream | 378404 | 12191390 ~ 12209449 (+) | True | LOC103027177 |
| TU237301 | other | upstream | 395102 | 12191390 ~ 12192751 (+) | False | LOC103027177 |
| TU237151 | other | upstream | 674397 | 11908872 ~ 11913456 (+) | True | G175108 |
| TU237508 | other | downstream | 147468 | 12739503 ~ 12745053 (+) | True | G175379 |
| TU238049 | other | downstream | 728749 | 13320784 ~ 13327641 (+) | False | LOC103028411 |
| TU238092 | other | downstream | 797291 | 13389326 ~ 13418416 (+) | True | LOC111195048 |
| TU238094 | other | downstream | 819075 | 13411110 ~ 13418416 (+) | False | LOC111195048 |
| TU238204 | other | downstream | 1087324 | 13679359 ~ 13685563 (+) | True | G175900 |
