Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_002651436.1 |
| length | 547 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 2 |
| gene id | LOC111195043 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035916.1 |
| NCBI id | CM008319.1 |
| chromosome length | 36262418 |
| location | 12633680 ~ 12635793 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU237469 | lncRNA | upstream | 36922 | 12596638 ~ 12596837 (+) | True | G175351 |
| TU237468 | lncRNA | upstream | 39131 | 12594224 ~ 12594628 (+) | True | G175350 |
| TU237465 | lncRNA | upstream | 41724 | 12587853 ~ 12592035 (+) | False | G175348 |
| TU237463 | lncRNA | upstream | 43105 | 12587853 ~ 12590654 (+) | False | G175348 |
| TU237490 | lncRNA | downstream | 23677 | 12659470 ~ 12660283 (+) | True | G175368 |
| TU237478 | lncRNA | downstream | 67821 | 12703614 ~ 12708778 (+) | True | G175356 |
| TU237495 | lncRNA | downstream | 74521 | 12710314 ~ 12711384 (+) | True | G175372 |
| TU237504 | lncRNA | downstream | 96289 | 12732082 ~ 12738872 (+) | True | G175378 |
| TU237507 | lncRNA | downstream | 102203 | 12737996 ~ 12738872 (+) | False | G175378 |
| XM_007238996.3 | mRNA | upstream | 93558 | 12524141 ~ 12540201 (+) | False | rnft1 |
| XM_015602943.2 | mRNA | upstream | 93558 | 12524141 ~ 12540201 (+) | False | rnft1 |
| XM_007238997.3 | mRNA | upstream | 94185 | 12524141 ~ 12539574 (+) | False | rnft1 |
| XM_022681538.1 | mRNA | upstream | 317025 | 12314732 ~ 12316734 (+) | True | LOC111195108 |
| XM_007242409.3 | mRNA | upstream | 440972 | 12191356 ~ 12192787 (+) | False | LOC103027177 |
| XM_022681073.1 | mRNA | downstream | 38085 | 12673878 ~ 12692133 (+) | True | ptrh2 |
| XM_007235407.2 | mRNA | downstream | 155430 | 12791223 ~ 12794193 (+) | True | LOC103039534 |
| XM_015601931.2 | mRNA | downstream | 160323 | 12796116 ~ 12809169 (+) | True | katnal1 |
| XM_007235408.3 | mRNA | downstream | 160324 | 12796117 ~ 12809169 (+) | False | katnal1 |
| XM_015601932.2 | mRNA | downstream | 160359 | 12796152 ~ 12809169 (+) | False | katnal1 |
| TU237308 | other | upstream | 424310 | 12191390 ~ 12209449 (+) | True | LOC103027177 |
| TU237301 | other | upstream | 441008 | 12191390 ~ 12192751 (+) | False | LOC103027177 |
| TU237151 | other | upstream | 720303 | 11908872 ~ 11913456 (+) | True | G175108 |
| TU237508 | other | downstream | 103710 | 12739503 ~ 12745053 (+) | True | G175379 |
| TU238049 | other | downstream | 684991 | 13320784 ~ 13327641 (+) | False | LOC103028411 |
| TU238092 | other | downstream | 753533 | 13389326 ~ 13418416 (+) | True | LOC111195048 |
| TU238094 | other | downstream | 775317 | 13411110 ~ 13418416 (+) | False | LOC111195048 |
| TU238204 | other | downstream | 1043566 | 13679359 ~ 13685563 (+) | True | G175900 |
