Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU241501 |
| length | 200 |
| lncRNA type | inter_gene |
| GC content | 0.32 |
| exon number | 1 |
| gene id | G178279 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035916.1 |
| NCBI id | CM008319.1 |
| chromosome length | 36262418 |
| location | 22099319 ~ 22099518 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU241473 | lncRNA | downstream | 171959 | 21925492 ~ 21927360 (-) | True | G178251 |
| TU241457 | lncRNA | downstream | 266330 | 21832741 ~ 21832989 (-) | True | G178237 |
| TU241456 | lncRNA | downstream | 282917 | 21816127 ~ 21816402 (-) | True | G178236 |
| TU241421 | lncRNA | downstream | 583334 | 21515588 ~ 21515985 (-) | True | G178201 |
| TU241415 | lncRNA | downstream | 623677 | 21475230 ~ 21475642 (-) | True | G178195 |
| TU241535 | lncRNA | upstream | 180827 | 22280345 ~ 22319081 (-) | True | G178300 |
| TU241548 | lncRNA | upstream | 234104 | 22333622 ~ 22334656 (-) | True | G178309 |
| TU241702 | lncRNA | upstream | 254356 | 22353874 ~ 22354311 (-) | True | G178405 |
| TU241696 | lncRNA | upstream | 285987 | 22385505 ~ 22393537 (-) | True | LOC111195068 |
| TU241701 | lncRNA | upstream | 285987 | 22385505 ~ 22393537 (-) | False | LOC111195068 |
| XM_007254081.3 | mRNA | downstream | 60382 | 21974507 ~ 22038937 (-) | True | plppr1 |
| XM_022680719.1 | mRNA | downstream | 176304 | 21922330 ~ 21923015 (-) | True | LOC111194991 |
| XM_007254078.3 | mRNA | downstream | 433593 | 21545217 ~ 21665726 (-) | True | epha5 |
| XM_007254077.3 | mRNA | downstream | 676074 | 21389227 ~ 21423245 (-) | True | LOC103045065 |
| XM_007260808.3 | mRNA | downstream | 786382 | 21297384 ~ 21312937 (-) | False | rassf6 |
| XM_022681249.1 | mRNA | upstream | 243938 | 22343456 ~ 22376932 (-) | True | snx30 |
| XM_007241058.3 | mRNA | upstream | 379195 | 22478713 ~ 22484769 (-) | True | enoph1 |
| XM_007241054.3 | mRNA | upstream | 401936 | 22501454 ~ 22506543 (-) | False | LOC103023660 |
| XM_022681265.1 | mRNA | upstream | 401951 | 22501469 ~ 22509783 (-) | False | LOC103023660 |
| XM_007255294.3 | mRNA | upstream | 442446 | 22541964 ~ 22578431 (-) | False | LOC103044350 |
| TU241489 | other | downstream | 165488 | 21933519 ~ 21933831 (-) | True | G178267 |
| TU241386 | other | downstream | 803486 | 21291522 ~ 21295833 (-) | True | G178173 |
| XR_002651453.1 | other | downstream | 2971197 | 19119786 ~ 19128122 (-) | False | LOC103035567 |
| TU240722 | other | downstream | 3007173 | 19091146 ~ 19092146 (-) | True | G177704 |
| TU240520 | other | downstream | 3696311 | 18397582 ~ 18403008 (-) | True | G177568 |
| TU241733 | other | upstream | 355979 | 22455497 ~ 22456779 (-) | True | G178426 |
| TU241723 | other | upstream | 401800 | 22501318 ~ 22506501 (-) | True | LOC103023660 |
| trnam-cau_23 | other | upstream | 431090 | 22530608 ~ 22530679 (-) | True | trnam-cau_23 |
| trnam-cau_24 | other | upstream | 431306 | 22530824 ~ 22530895 (-) | True | trnam-cau_24 |
| trnam-cau_25 | other | upstream | 431522 | 22531040 ~ 22531111 (-) | True | trnam-cau_25 |
