Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU241772 |
| length | 493 |
| lncRNA type | intronic |
| GC content | 0.35 |
| exon number | 2 |
| gene id | G178452 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035916.1 |
| NCBI id | CM008319.1 |
| chromosome length | 36262418 |
| location | 22749513 ~ 22750079 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU241745 | lncRNA | downstream | 201533 | 22511049 ~ 22547980 (-) | True | G178436 |
| TU241753 | lncRNA | downstream | 222602 | 22519464 ~ 22526911 (-) | True | G178441 |
| TU241750 | lncRNA | downstream | 225904 | 22515661 ~ 22523609 (-) | True | G178440 |
| TU241751 | lncRNA | downstream | 225904 | 22515661 ~ 22523609 (-) | False | G178440 |
| TU241752 | lncRNA | downstream | 225904 | 22515661 ~ 22523609 (-) | False | G178440 |
| TU241851 | lncRNA | upstream | 120079 | 22870158 ~ 22880309 (-) | True | G178505 |
| TU241872 | lncRNA | upstream | 158713 | 22908792 ~ 22913269 (-) | True | G178521 |
| TU241883 | lncRNA | upstream | 180030 | 22930109 ~ 22930968 (-) | True | G178528 |
| TU241859 | lncRNA | upstream | 185427 | 22935506 ~ 22940533 (-) | False | LOC111195067 |
| TU241861 | lncRNA | upstream | 185427 | 22935506 ~ 22941079 (-) | True | LOC111195067 |
| XM_015607367.2 | mRNA | downstream | 24364 | 22696309 ~ 22725149 (-) | False | map3k1 |
| XM_022681257.1 | mRNA | downstream | 25371 | 22696309 ~ 22724142 (-) | False | map3k1 |
| XM_007255286.3 | mRNA | downstream | 55581 | 22679197 ~ 22693932 (-) | True | LOC103042817 |
| XM_022681260.1 | mRNA | downstream | 57052 | 22682449 ~ 22692461 (-) | False | LOC103042817 |
| XM_015607372.2 | mRNA | downstream | 57068 | 22679197 ~ 22692445 (-) | False | LOC103042817 |
| XM_007255278.3 | mRNA | upstream | 131045 | 22881124 ~ 22897545 (-) | True | LOC103040684 |
| XM_022681259.1 | mRNA | upstream | 149397 | 22899476 ~ 22907374 (-) | True | ddx4 |
| XM_022681266.1 | mRNA | upstream | 186479 | 22936558 ~ 22940511 (-) | False | LOC111195067 |
| XM_022681268.1 | mRNA | upstream | 195082 | 22945161 ~ 22957202 (-) | True | sh2d4a |
| XM_022681269.1 | mRNA | upstream | 195082 | 22945161 ~ 22957186 (-) | False | sh2d4a |
| TU241770 | other | downstream | 76830 | 22672132 ~ 22672683 (-) | True | G178450 |
| trnam-cau_39 | other | downstream | 213014 | 22536428 ~ 22536499 (-) | True | trnam-cau_39 |
| trnar-ccu_33 | other | downstream | 213179 | 22536262 ~ 22536334 (-) | True | trnar-ccu_33 |
| trnam-cau_38 | other | downstream | 213258 | 22536184 ~ 22536255 (-) | True | trnam-cau_38 |
| trnam-cau_37 | other | downstream | 214014 | 22535428 ~ 22535499 (-) | True | trnam-cau_37 |
| XR_002651463.1 | other | upstream | 185411 | 22935490 ~ 22940511 (-) | False | LOC111195067 |
| TU241888 | other | upstream | 202607 | 22952686 ~ 22957226 (-) | False | sh2d4a |
| TU242520 | other | upstream | 2380903 | 25130982 ~ 25134156 (-) | True | G178982 |
| TU242660 | other | upstream | 2454750 | 25204829 ~ 25207353 (-) | False | LOC103025094 |
| TU243326 | other | upstream | 4690152 | 27440231 ~ 27443316 (-) | True | G179569 |
