Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_002651463.1 |
| length | 1019 |
| RNA type | misc_RNA |
| GC content | 0.48 |
| exon number | 6 |
| gene id | LOC111195067 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035916.1 |
| NCBI id | CM008319.1 |
| chromosome length | 36262418 |
| location | 22935490 ~ 22941664 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU241883 | lncRNA | downstream | 4522 | 22930109 ~ 22930968 (-) | True | G178528 |
| TU241872 | lncRNA | downstream | 22221 | 22908792 ~ 22913269 (-) | True | G178521 |
| TU241851 | lncRNA | downstream | 55181 | 22870158 ~ 22880309 (-) | True | G178505 |
| TU241772 | lncRNA | downstream | 185411 | 22749513 ~ 22750079 (-) | True | G178452 |
| TU241745 | lncRNA | downstream | 387510 | 22511049 ~ 22547980 (-) | True | G178436 |
| TU241912 | lncRNA | upstream | 178197 | 23118708 ~ 23188801 (-) | True | G178550 |
| TU241913 | lncRNA | upstream | 186702 | 23127213 ~ 23188801 (-) | False | G178550 |
| XR_002651467.1 | lncRNA | upstream | 281043 | 23221554 ~ 23222498 (-) | True | LOC111195071 |
| TU241940 | lncRNA | upstream | 314727 | 23255238 ~ 23255493 (-) | True | G178575 |
| TU242041 | lncRNA | upstream | 470103 | 23410614 ~ 23410877 (-) | True | G178660 |
| XM_022681259.1 | mRNA | downstream | 28116 | 22899476 ~ 22907374 (-) | True | ddx4 |
| XM_007255278.3 | mRNA | downstream | 37945 | 22881124 ~ 22897545 (-) | True | LOC103040684 |
| XM_015607366.2 | mRNA | downstream | 171078 | 22696309 ~ 22764412 (-) | True | map3k1 |
| XM_015607367.2 | mRNA | downstream | 210341 | 22696309 ~ 22725149 (-) | False | map3k1 |
| XM_022681257.1 | mRNA | downstream | 211348 | 22696309 ~ 22724142 (-) | False | map3k1 |
| XM_022681268.1 | mRNA | upstream | 4650 | 22945161 ~ 22957202 (-) | True | sh2d4a |
| XM_022681269.1 | mRNA | upstream | 4650 | 22945161 ~ 22957186 (-) | False | sh2d4a |
| XM_022681267.1 | mRNA | upstream | 4650 | 22945161 ~ 22956858 (-) | False | sh2d4a |
| XM_022681277.1 | mRNA | upstream | 316014 | 23256525 ~ 23403475 (-) | False | nrg1 |
| XM_015607369.2 | mRNA | upstream | 316014 | 23256525 ~ 23403418 (-) | False | nrg1 |
| TU241770 | other | downstream | 262807 | 22672132 ~ 22672683 (-) | True | G178450 |
| trnam-cau_39 | other | downstream | 398991 | 22536428 ~ 22536499 (-) | True | trnam-cau_39 |
| trnar-ccu_33 | other | downstream | 399156 | 22536262 ~ 22536334 (-) | True | trnar-ccu_33 |
| trnam-cau_38 | other | downstream | 399235 | 22536184 ~ 22536255 (-) | True | trnam-cau_38 |
| trnam-cau_37 | other | downstream | 399991 | 22535428 ~ 22535499 (-) | True | trnam-cau_37 |
| TU241888 | other | upstream | 12175 | 22952686 ~ 22957226 (-) | False | sh2d4a |
| TU242520 | other | upstream | 2190471 | 25130982 ~ 25134156 (-) | True | G178982 |
| TU242660 | other | upstream | 2264318 | 25204829 ~ 25207353 (-) | False | LOC103025094 |
| TU243326 | other | upstream | 4499720 | 27440231 ~ 27443316 (-) | True | G179569 |
| XR_002651480.1 | other | upstream | 4523528 | 27464039 ~ 27464863 (-) | True | LOC103045184 |
