Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU241888 |
| length | 931 |
| RNA type | TUCP |
| GC content | 0.47 |
| exon number | 4 |
| gene id | sh2d4a |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035916.1 |
| NCBI id | CM008319.1 |
| chromosome length | 36262418 |
| location | 22945161 ~ 22957226 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU241862 | lncRNA | downstream | 11022 | 22935506 ~ 22941664 (-) | False | LOC111195067 |
| TU241861 | lncRNA | downstream | 11607 | 22935506 ~ 22941079 (-) | True | LOC111195067 |
| TU241859 | lncRNA | downstream | 12153 | 22935506 ~ 22940533 (-) | False | LOC111195067 |
| TU241860 | lncRNA | downstream | 12153 | 22936526 ~ 22940533 (-) | False | LOC111195067 |
| TU241883 | lncRNA | downstream | 21718 | 22930109 ~ 22930968 (-) | True | G178528 |
| TU241912 | lncRNA | upstream | 161482 | 23118708 ~ 23188801 (-) | True | G178550 |
| TU241913 | lncRNA | upstream | 169987 | 23127213 ~ 23188801 (-) | False | G178550 |
| XR_002651467.1 | lncRNA | upstream | 264328 | 23221554 ~ 23222498 (-) | True | LOC111195071 |
| TU241940 | lncRNA | upstream | 298012 | 23255238 ~ 23255493 (-) | True | G178575 |
| TU242041 | lncRNA | upstream | 453388 | 23410614 ~ 23410877 (-) | True | G178660 |
| XM_022681266.1 | mRNA | downstream | 12175 | 22936558 ~ 22940511 (-) | False | LOC111195067 |
| XM_022681259.1 | mRNA | downstream | 45312 | 22899476 ~ 22907374 (-) | True | ddx4 |
| XM_007255278.3 | mRNA | downstream | 55141 | 22881124 ~ 22897545 (-) | True | LOC103040684 |
| XM_015607366.2 | mRNA | downstream | 188274 | 22696309 ~ 22764412 (-) | True | map3k1 |
| XM_022681277.1 | mRNA | upstream | 299299 | 23256525 ~ 23403475 (-) | False | nrg1 |
| XM_015607369.2 | mRNA | upstream | 299299 | 23256525 ~ 23403418 (-) | False | nrg1 |
| XM_022681274.1 | mRNA | upstream | 299299 | 23256525 ~ 23403182 (-) | False | nrg1 |
| XM_022681275.1 | mRNA | upstream | 299299 | 23256525 ~ 23403182 (-) | False | nrg1 |
| XM_022681276.1 | mRNA | upstream | 299299 | 23256525 ~ 23403182 (-) | False | nrg1 |
| XR_002651463.1 | other | downstream | 12175 | 22935490 ~ 22940511 (-) | False | LOC111195067 |
| TU241770 | other | downstream | 280003 | 22672132 ~ 22672683 (-) | True | G178450 |
| trnam-cau_39 | other | downstream | 416187 | 22536428 ~ 22536499 (-) | True | trnam-cau_39 |
| trnar-ccu_33 | other | downstream | 416352 | 22536262 ~ 22536334 (-) | True | trnar-ccu_33 |
| trnam-cau_38 | other | downstream | 416431 | 22536184 ~ 22536255 (-) | True | trnam-cau_38 |
| TU242520 | other | upstream | 2173756 | 25130982 ~ 25134156 (-) | True | G178982 |
| TU242660 | other | upstream | 2247603 | 25204829 ~ 25207353 (-) | False | LOC103025094 |
| TU243326 | other | upstream | 4483005 | 27440231 ~ 27443316 (-) | True | G179569 |
| XR_002651480.1 | other | upstream | 4506813 | 27464039 ~ 27464863 (-) | True | LOC103045184 |
| TU243317 | other | upstream | 4516129 | 27473355 ~ 27477978 (-) | False | ift46 |
