Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU241957 |
| length | 510 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 3 |
| gene id | LOC111195072 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035916.1 |
| NCBI id | CM008319.1 |
| chromosome length | 36262418 |
| location | 23274449 ~ 23348016 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU241944 | lncRNA | upstream | 70465 | 23260571 ~ 23263280 (+) | True | G178578 |
| TU241817 | lncRNA | upstream | 376586 | 22950963 ~ 22957159 (+) | True | G178482 |
| TU241809 | lncRNA | upstream | 390396 | 22943126 ~ 22943349 (+) | True | G178477 |
| TU241803 | lncRNA | upstream | 392124 | 22935483 ~ 22941621 (+) | True | G178474 |
| TU241988 | lncRNA | downstream | 49239 | 23397023 ~ 23397235 (+) | True | G178614 |
| TU241990 | lncRNA | downstream | 55186 | 23402970 ~ 23403734 (+) | True | G178616 |
| TU241991 | lncRNA | downstream | 63321 | 23411105 ~ 23418343 (+) | True | G178617 |
| TU241999 | lncRNA | downstream | 77371 | 23425155 ~ 23426497 (+) | True | G178623 |
| TU242000 | lncRNA | downstream | 79601 | 23427385 ~ 23432711 (+) | True | G178624 |
| XM_007255267.3 | mRNA | upstream | 116487 | 23203476 ~ 23217258 (+) | True | fut10 |
| XM_022681271.1 | mRNA | upstream | 146521 | 22995089 ~ 23187224 (+) | False | LOC103038592 |
| XM_022681283.1 | mRNA | downstream | 111584 | 23459368 ~ 23461975 (+) | True | purg |
| XM_022680722.1 | mRNA | downstream | 131753 | 23479537 ~ 23494300 (+) | True | LOC111188215 |
| XM_022681284.1 | mRNA | downstream | 146370 | 23494154 ~ 23497618 (+) | True | LOC103034079 |
| XM_022681285.1 | mRNA | downstream | 155523 | 23503307 ~ 23514711 (+) | True | ppp2cb |
| XM_007255251.3 | mRNA | downstream | 155523 | 23503307 ~ 23514711 (+) | False | ppp2cb |
| TU241823 | other | upstream | 368756 | 22963447 ~ 22964989 (+) | True | G178485 |
| TU241665 | other | upstream | 624188 | 22689001 ~ 22709557 (+) | True | G178388 |
| TU241624 | other | upstream | 787615 | 22544640 ~ 22546130 (+) | True | G178352 |
| XR_002651459.1 | other | upstream | 831586 | 22493440 ~ 22502159 (+) | False | LOC103022948 |
| XR_002651470.1 | other | downstream | 356203 | 23703987 ~ 23707849 (+) | True | LOC111195073 |
| TU242273 | other | downstream | 1100096 | 24447880 ~ 24454622 (+) | False | LOC103032894 |
| trnam-cau_40 | other | downstream | 1154090 | 24501874 ~ 24501945 (+) | True | trnam-cau_40 |
| TU243054 | other | downstream | 3566102 | 26913886 ~ 26916344 (+) | False | rnasek |
| TU243090 | other | downstream | 4176534 | 27524318 ~ 27525389 (+) | False | LOC103038954 |
