Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU243560 |
| length | 647 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 2 |
| gene id | G179779 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035916.1 |
| NCBI id | CM008319.1 |
| chromosome length | 36262418 |
| location | 28659992 ~ 28848744 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU243545 | lncRNA | downstream | 5244 | 28654522 ~ 28654748 (-) | True | G179766 |
| TU243543 | lncRNA | downstream | 6104 | 28653671 ~ 28653888 (-) | True | G179764 |
| TU243541 | lncRNA | downstream | 9333 | 28649877 ~ 28650659 (-) | True | G179762 |
| TU243515 | lncRNA | downstream | 45557 | 28614208 ~ 28614435 (-) | True | G179737 |
| TU243496 | lncRNA | downstream | 77723 | 28582037 ~ 28582269 (-) | True | G179718 |
| TU243635 | lncRNA | upstream | 63425 | 28912169 ~ 28912471 (-) | True | G179842 |
| TU243636 | lncRNA | upstream | 66544 | 28915288 ~ 28933142 (-) | True | G179843 |
| TU243638 | lncRNA | upstream | 67938 | 28916682 ~ 28917062 (-) | True | G179844 |
| TU243639 | lncRNA | upstream | 102720 | 28951464 ~ 28951680 (-) | True | G179845 |
| TU243619 | lncRNA | upstream | 105305 | 28954049 ~ 28974201 (-) | False | G179837 |
| XM_022680725.1 | mRNA | downstream | 89887 | 28411012 ~ 28570105 (-) | True | LOC103039144 |
| XM_007258115.3 | mRNA | downstream | 1053709 | 27600092 ~ 27606283 (-) | True | LOC103041089 |
| XM_007258116.3 | mRNA | downstream | 1065468 | 27591571 ~ 27594524 (-) | True | bsx |
| XM_022681355.1 | mRNA | downstream | 1120282 | 27528660 ~ 27539710 (-) | False | zpr1 |
| XM_022681361.1 | mRNA | upstream | 90847 | 28939591 ~ 28949916 (-) | True | panx3 |
| XM_022681362.1 | mRNA | upstream | 105295 | 28954039 ~ 28998439 (-) | False | pknox2 |
| XM_022681363.1 | mRNA | upstream | 105295 | 28954039 ~ 28991641 (-) | True | pknox2 |
| XM_022681364.1 | mRNA | upstream | 310296 | 29159040 ~ 29364276 (-) | False | robo3 |
| XM_022681365.1 | mRNA | upstream | 310296 | 29159040 ~ 29363959 (-) | False | robo3 |
| TU243338 | other | downstream | 1093300 | 27562974 ~ 27566692 (-) | True | G179578 |
| TU243339 | other | downstream | 1093300 | 27562974 ~ 27566692 (-) | False | G179578 |
| TU243357 | other | downstream | 1134604 | 27524328 ~ 27525388 (-) | True | G179583 |
| TU243318 | other | downstream | 1135883 | 27523134 ~ 27524109 (-) | False | LOC103038646 |
| TU243317 | other | downstream | 1182014 | 27473355 ~ 27477978 (-) | False | ift46 |
| TU243597 | other | upstream | 1946 | 28850690 ~ 28851105 (-) | True | G179816 |
| TU244105 | other | upstream | 2098202 | 30946946 ~ 30957767 (-) | False | G180188 |
| TU244401 | other | upstream | 3073551 | 31922295 ~ 31934794 (-) | False | LOC103030555 |
| TU244539 | other | upstream | 3391435 | 32240179 ~ 32262573 (-) | False | tmem135 |
| XR_002651488.1 | other | upstream | 4328019 | 33176763 ~ 33177497 (-) | True | LOC111195091 |
