Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU244424 |
| length | 527 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 4 |
| gene id | G180454 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035916.1 |
| NCBI id | CM008319.1 |
| chromosome length | 36262418 |
| location | 32077364 ~ 32079824 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU244323 | lncRNA | downstream | 317926 | 31758098 ~ 31759438 (-) | True | G180366 |
| TU244331 | lncRNA | downstream | 334374 | 31742731 ~ 31742990 (-) | True | G180373 |
| TU244300 | lncRNA | downstream | 440816 | 31636347 ~ 31636548 (-) | True | G180344 |
| TU244298 | lncRNA | downstream | 495427 | 31581704 ~ 31581937 (-) | True | G180342 |
| TU244294 | lncRNA | downstream | 512496 | 31564597 ~ 31564868 (-) | True | G180338 |
| TU244533 | lncRNA | upstream | 125297 | 32205121 ~ 32208569 (-) | True | G180543 |
| TU244530 | lncRNA | upstream | 183750 | 32263574 ~ 32264739 (-) | True | G180540 |
| TU244553 | lncRNA | upstream | 242277 | 32322101 ~ 32326822 (-) | True | G180562 |
| TU244564 | lncRNA | upstream | 356501 | 32436325 ~ 32445752 (-) | False | tiam1 |
| TU244569 | lncRNA | upstream | 376722 | 32456546 ~ 32457411 (-) | True | G180570 |
| XM_022680726.1 | mRNA | downstream | 5440 | 31894202 ~ 32071924 (-) | True | LOC103030555 |
| XM_015605316.2 | mRNA | downstream | 229395 | 31761901 ~ 31847969 (-) | True | LOC103030874 |
| XM_007247265.3 | mRNA | downstream | 535889 | 31519076 ~ 31541475 (-) | True | LOC103041957 |
| XM_022681424.1 | mRNA | downstream | 568143 | 31499084 ~ 31509221 (-) | True | LOC111195087 |
| XM_007247269.3 | mRNA | downstream | 580646 | 31493584 ~ 31496718 (-) | True | timm10b |
| XM_007247264.3 | mRNA | upstream | 10865 | 32090689 ~ 32096800 (-) | True | LOC103041448 |
| XM_007247263.3 | mRNA | upstream | 20377 | 32100201 ~ 32106911 (-) | True | LOC103041136 |
| XM_022680727.1 | mRNA | upstream | 165183 | 32245007 ~ 32262598 (-) | True | tmem135 |
| XM_007247258.3 | mRNA | upstream | 185173 | 32264997 ~ 32276777 (-) | True | cct8 |
| XM_007247259.3 | mRNA | upstream | 185173 | 32264997 ~ 32276776 (-) | False | cct8 |
| TU244401 | other | downstream | 142570 | 31922295 ~ 31934794 (-) | False | LOC103030555 |
| TU244105 | other | downstream | 1119597 | 30946946 ~ 30957767 (-) | False | G180188 |
| TU243597 | other | downstream | 3226259 | 28850690 ~ 28851105 (-) | True | G179816 |
| TU243338 | other | downstream | 4510672 | 27562974 ~ 27566692 (-) | True | G179578 |
| TU243339 | other | downstream | 4510672 | 27562974 ~ 27566692 (-) | False | G179578 |
| TU244539 | other | upstream | 160355 | 32240179 ~ 32262573 (-) | False | tmem135 |
| XR_002651488.1 | other | upstream | 1096939 | 33176763 ~ 33177497 (-) | True | LOC111195091 |
| TU245774 | other | upstream | 3353408 | 35433232 ~ 35470431 (-) | True | LOC103042595 |
