RNA id: TU244731



Basic Information


Item Value
RNA id TU244731
length 301
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G180687
representative True

Chromosome Information


Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 33036060 ~ 33036360 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


TCCAATCCATTCCACCCAACAAAAAAACTGGCCGAATCCTATCCAGGGTTTTCACACACCACCCCAGGGCACATGGACACCAGGTTCTACCTCCACCTGGAGATTACCGGAGCGTGTAACTGGCAAAGTTTCACGAGGCACAATAAGTGAGCCTCTCTCCCTTCCTCCACTCTGCAGCCTCAAATCTAACAGCGGTCAGCTTGGTAGTGATTTACTCACTATCTACAGCACTGAATTCTAGCGTTTTCTAGTATTTTTATAATACTTTGAGCTGAGAACTTCTTACATGACCTGTCTCTCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU244719 lncRNA downstream 68405 32967398 ~ 32967655 (-) True G180677
TU244718 lncRNA downstream 92240 32943194 ~ 32943820 (-) True G180676
TU244706 lncRNA downstream 127840 32839216 ~ 32908220 (-) False G180668
TU244709 lncRNA downstream 142953 32868926 ~ 32893107 (-) True G180668
TU244701 lncRNA downstream 233687 32801966 ~ 32802373 (-) True G180666
TU244755 lncRNA upstream 50165 33086525 ~ 33086755 (-) True G180707
TU244757 lncRNA upstream 69800 33106160 ~ 33106465 (-) True G180709
TU244853 lncRNA upstream 247019 33283379 ~ 33283609 (-) True G180778
TU244860 lncRNA upstream 281485 33317845 ~ 33318068 (-) True G180785
TU244926 lncRNA upstream 555278 33591638 ~ 33612072 (-) True G180843
XM_022681439.1 mRNA downstream 108307 32872810 ~ 32927753 (-) True LOC103035222
XM_022681438.1 mRNA downstream 187834 32771805 ~ 32848226 (-) False LOC103035536
XM_022680729.1 mRNA upstream 267455 33303815 ~ 33367594 (-) True LOC103028027
XM_022681442.1 mRNA upstream 337140 33373500 ~ 33395265 (-) True LOC103027697
XM_022681443.1 mRNA upstream 362995 33399355 ~ 33446115 (-) True LOC107197574
XM_022681444.1 mRNA upstream 490312 33526672 ~ 33746776 (-) True LOC103027380
XM_015605325.2 mRNA upstream 797585 33833945 ~ 33835554 (-) True LOC107197575
TU244539 other downstream 773487 32240179 ~ 32262573 (-) False tmem135
TU244401 other downstream 1101266 31922295 ~ 31934794 (-) False LOC103030555
TU244105 other downstream 2078293 30946946 ~ 30957767 (-) False G180188
TU243597 other downstream 4184955 28850690 ~ 28851105 (-) True G179816
TU243339 other downstream 5469368 27562974 ~ 27566692 (-) False G179578
XR_002651488.1 other upstream 140403 33176763 ~ 33177497 (-) True LOC111195091
TU245774 other upstream 2396872 35433232 ~ 35470431 (-) True LOC103042595

Expression Profile