RNA id: XM_007241058.3


Basic Information

Item Value
RNA id XM_007241058.3
length 1510
RNA type mRNA
GC content 0.45
exon number 6
gene id enoph1
representative True

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 22478713 ~ 22484769 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

AGAACTATAGAAATAGAGTTTTTTTCTTACCATTATTTGGCAACCCGTTGACCAAGCCATGTGTTAGCAGCAGAGTGCTAGCTGGCTAGTGTGCTCCTCTGGGCTGCTTTTCTCTGGATTATCTGTGATTGTTGGTCGGGCGGTGAATCTGGATGATCTGAGGAACTGATTCCTGTACTGATACtattctgaaaactttataataGAGGCAGATCGTTCGCCATTCTGGAAGATGGCAACGATTACAGTTCCGGAGAACGTTAGCGTCTTTCTGCTGGACATAGAAGGAACCACGACCCCCATCACATTCGTGAAGGACGTTTTATTTCCATACATCAGAGAGCATCTGGAGGACTACCTGTCAGCGCACTGGGAGGAGGATGAGTGCAAGCAGGACGTGCATCTTCTAAAGAAACAGGCTGAAGAAGACTTAAAGCAGAACAGAGCGTGCCCAGTTCACACAGTGGATCAGACGGTGCACACGGATGAGGAGAAGGCTATCCGGGAGGTTGTGGATAATGTCCTCTGGCAGATGGCTGCAGACAGGAAAACCACTGCACTGAAGCAGTTGCAAGGCCAcatgtggagagcagcctatgcTGCAGGGAAGATCAAAGGCGAAGTGTATCAAGACGTGGTTCCTGCTATCAGAAGATGGAGGCGGAATGGTCTCAAAGTCTACATCTACTCCTCAGGAAGTATAGAAGCTCAGAAGCTGCTGTTCGGGTACTCGGTTGAAGGAGATTTGTTAGAACTGTTTGATGGTCACTTTGACACCAATGTTGGCGCCAAAGTGGAGAGTAAAAGCTATGAAAGGATTGCGGAGAGGATTGGCTGCTCACCAGAAGACATTATGTTCTTAACAGATGTCACACGAGAGGCGAAGGCGGCTGAGGATGCCAGGCTGaacgtggtggtggtggtgcgaCCAGGCAACATGGAGCTGACTGAGGAGGAGAGGAGCCAGTATAGTACCATTACGACGTTTAGCCAGCTGGAACTCGGTGGAAGTGCTTGACAGGTCTGGAAAgaagagtgtgtgtttctgcactCCTTCtagtggacttcaggagaacggGAGGTGTGGCCCTACAGCGCTTGTGTAGCCCGTTTACTTGTGCTAAATCAACATGTTATGCAGCAAGTACCAAGTGCATTACAGTTGTACTGACTGAAATTGTAAAATTTTAACGTgcttgcctgtttttttttttttttgttctgtttttacacaaaaaatatgttgAAGTTTGTGTATTATATTCCATCATTCTACCTGGATGTGTCTGATGCAGTAAAGTAGTGCTGATGTATTAAGTGTAATTTAAGTTAATGATTATGAATGGGCACATGGTTAATGTTGTATTTGCAACAGTGTTAGTTTGTCAGTAGCCAATCAAATGGTAGTACCTGCATCTGTGTACTGTTATCCTGTACTGTAACATGTTACACACTTTTCCTACAAACATAGGGACCATGTGGAATAAAACACATGATCTAAAAAACATTA

Function

GO:

id name namespace
GO:0019509 L-methionine salvage from methylthioadenosine biological_process
GO:0016311 dephosphorylation biological_process
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0043874 acireductone synthase activity molecular_function
GO:0000287 magnesium ion binding molecular_function

KEGG:

id description
K09880 mtnC, ENOPH1; enolase-phosphatase E1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU241735 lncRNA downstream 16439 22460655 ~ 22462274 (-) True G178427
TU241706 lncRNA downstream 25094 22446542 ~ 22453619 (-) True G178409
TU241707 lncRNA downstream 31307 22445592 ~ 22447406 (-) False G178409
TU241728 lncRNA downstream 37319 22439163 ~ 22441394 (-) True G178423
XR_002651465.1 lncRNA downstream 82507 22391187 ~ 22396206 (-) False LOC111195068
TU241717 lncRNA upstream 2076 22486845 ~ 22491505 (-) False G178416
TU241718 lncRNA upstream 4121 22488890 ~ 22491505 (-) False G178416
TU241720 lncRNA upstream 4121 22488890 ~ 22491505 (-) True G178416
TU241721 lncRNA upstream 8687 22493456 ~ 22499247 (-) True G178417
TU241745 lncRNA upstream 26280 22511049 ~ 22547980 (-) True G178436
XM_022681249.1 mRNA downstream 101781 22343456 ~ 22376932 (-) True snx30
XM_007254081.3 mRNA downstream 439776 21974507 ~ 22038937 (-) True plppr1
XM_022680719.1 mRNA downstream 555698 21922330 ~ 21923015 (-) True LOC111194991
XM_007254078.3 mRNA downstream 812987 21545217 ~ 21665726 (-) True epha5
XM_007254077.3 mRNA downstream 1055468 21389227 ~ 21423245 (-) True LOC103045065
XM_007241054.3 mRNA upstream 16685 22501454 ~ 22506543 (-) False LOC103023660
XM_022681265.1 mRNA upstream 16700 22501469 ~ 22509783 (-) False LOC103023660
XM_007255294.3 mRNA upstream 57195 22541964 ~ 22578431 (-) False LOC103044350
XM_007255292.3 mRNA upstream 57195 22541964 ~ 22578429 (-) False LOC103044350
XM_007255298.3 mRNA upstream 57195 22541964 ~ 22561493 (-) True LOC103044350
TU241733 other downstream 21934 22455497 ~ 22456779 (-) True G178426
TU241489 other downstream 544882 21933519 ~ 21933831 (-) True G178267
TU241386 other downstream 1182880 21291522 ~ 21295833 (-) True G178173
XR_002651453.1 other downstream 3350591 19119786 ~ 19128122 (-) False LOC103035567
TU240722 other downstream 3386567 19091146 ~ 19092146 (-) True G177704
TU241723 other upstream 16549 22501318 ~ 22506501 (-) True LOC103023660
trnam-cau_23 other upstream 45839 22530608 ~ 22530679 (-) True trnam-cau_23
trnam-cau_24 other upstream 46055 22530824 ~ 22530895 (-) True trnam-cau_24
trnam-cau_25 other upstream 46271 22531040 ~ 22531111 (-) True trnam-cau_25
trnar-ccu_29 other upstream 46349 22531118 ~ 22531190 (-) True trnar-ccu_29

Expression Profile