Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_022681241.1 |
| length | 877 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 6 |
| gene id | hdhd2 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035916.1 |
| NCBI id | CM008319.1 |
| chromosome length | 36262418 |
| location | 20403494 ~ 20407568 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0016787 | hydrolase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU241203 | lncRNA | upstream | 4435 | 20396382 ~ 20399165 (+) | False | ier3ip1 |
| TU241192 | lncRNA | upstream | 71597 | 20331234 ~ 20332003 (+) | True | G178035 |
| TU241186 | lncRNA | upstream | 116021 | 20287072 ~ 20287579 (+) | True | G178029 |
| TU241183 | lncRNA | upstream | 140826 | 20261886 ~ 20262774 (+) | True | G178026 |
| TU241117 | lncRNA | upstream | 162681 | 20236217 ~ 20240919 (+) | True | G177984 |
| TU241220 | lncRNA | downstream | 13801 | 20421369 ~ 20424714 (+) | True | G178055 |
| TU241262 | lncRNA | downstream | 194883 | 20602451 ~ 20602789 (+) | True | G178088 |
| TU241265 | lncRNA | downstream | 217211 | 20624779 ~ 20625028 (+) | True | G178091 |
| TU241271 | lncRNA | downstream | 313505 | 20721073 ~ 20721391 (+) | True | G178097 |
| TU241287 | lncRNA | downstream | 524213 | 20931781 ~ 20958483 (+) | True | G178108 |
| XM_007260817.3 | mRNA | upstream | 4435 | 20396377 ~ 20399165 (+) | True | ier3ip1 |
| XM_015608718.2 | mRNA | upstream | 8444 | 20381689 ~ 20395156 (+) | False | skor2 |
| XM_022681238.1 | mRNA | upstream | 8444 | 20386530 ~ 20395156 (+) | False | skor2 |
| XM_007260820.3 | mRNA | upstream | 8444 | 20386531 ~ 20395156 (+) | True | skor2 |
| XM_007260822.3 | mRNA | upstream | 145855 | 20229527 ~ 20257745 (+) | False | smad2 |
| XM_007260816.1 | mRNA | downstream | 21194 | 20428762 ~ 20578785 (+) | True | galt |
| XM_007260812.3 | mRNA | downstream | 434469 | 20842037 ~ 21177458 (+) | True | LOC103022731 |
| XM_007260815.3 | mRNA | downstream | 795694 | 21203262 ~ 21258587 (+) | True | LOC103023250 |
| XM_007260811.3 | mRNA | downstream | 877678 | 21285246 ~ 21295849 (+) | True | cst8 |
| XM_022681245.1 | mRNA | downstream | 918644 | 21326212 ~ 21369274 (+) | False | musk |
| TU241070 | other | upstream | 264036 | 20138822 ~ 20139564 (+) | True | G177950 |
| TU241050 | other | upstream | 309738 | 20089261 ~ 20093862 (+) | False | LOC103043854 |
| XR_002651455.1 | other | upstream | 627809 | 19750942 ~ 19775791 (+) | False | LOC103042206 |
| TU240867 | other | upstream | 681211 | 19720301 ~ 19722389 (+) | False | LOC111194983 |
| TU240134 | other | upstream | 1859603 | 18539898 ~ 18543997 (+) | False | LOC103024155 |
| TU241506 | other | downstream | 1841576 | 22249144 ~ 22301065 (+) | False | LOC103046694 |
| TU241591 | other | downstream | 2052824 | 22460392 ~ 22465702 (+) | False | LOC103025565 |
| TU241593 | other | downstream | 2052824 | 22460392 ~ 22465702 (+) | False | LOC103025565 |
| TU241592 | other | downstream | 2054423 | 22461991 ~ 22465702 (+) | False | LOC103025565 |
| XR_002651461.1 | other | downstream | 2079255 | 22486823 ~ 22491503 (+) | False | hnrnpdl |
