Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU246223 |
| length | 585 |
| lncRNA type | sense_over |
| GC content | 0.42 |
| exon number | 7 |
| gene id | LOC111195150 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035917.1 |
| NCBI id | CM008320.1 |
| chromosome length | 21661149 |
| location | 300095 ~ 306312 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0031667 | response to nutrient levels | biological_process |
| GO:0009991 | response to extracellular stimulus | biological_process |
| GO:0004982 | N-formyl peptide receptor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU246216 | lncRNA | upstream | 7867 | 289010 ~ 292251 (+) | True | LOC111195149 |
| TU246215 | lncRNA | upstream | 17314 | 282369 ~ 282804 (+) | True | G181802 |
| TU246213 | lncRNA | upstream | 20328 | 279565 ~ 279790 (+) | True | G181800 |
| TU246210 | lncRNA | upstream | 26285 | 271554 ~ 273833 (+) | True | G181798 |
| TU246208 | lncRNA | upstream | 30861 | 268702 ~ 269257 (+) | True | G181797 |
| TU246229 | lncRNA | downstream | 26268 | 332580 ~ 333245 (+) | True | G181811 |
| TU246234 | lncRNA | downstream | 126227 | 432539 ~ 433567 (+) | True | G181816 |
| TU246238 | lncRNA | downstream | 138769 | 445081 ~ 445298 (+) | True | G181820 |
| TU246239 | lncRNA | downstream | 186286 | 492598 ~ 500981 (+) | True | G181821 |
| TU246362 | lncRNA | downstream | 323595 | 629907 ~ 663519 (+) | True | G181927 |
| XM_022681573.1 | mRNA | upstream | 8576 | 289336 ~ 291542 (+) | False | LOC111195149 |
| XM_022681623.1 | mRNA | upstream | 35338 | 258891 ~ 264780 (+) | False | LOC111195169 |
| XM_022681622.1 | mRNA | upstream | 35338 | 258893 ~ 264780 (+) | True | LOC111195169 |
| XM_022681620.1 | mRNA | upstream | 43935 | 250476 ~ 256183 (+) | True | LOC103031511 |
| XM_022681619.1 | mRNA | upstream | 52798 | 245466 ~ 247320 (+) | True | LOC111195167 |
| XM_022681624.1 | mRNA | downstream | 1365 | 307677 ~ 315123 (+) | True | LOC103032143 |
| XM_015604221.2 | mRNA | downstream | 19324 | 325636 ~ 329837 (+) | False | LOC103032759 |
| XM_022681627.1 | mRNA | downstream | 19324 | 325636 ~ 329585 (+) | False | LOC103032759 |
| XM_022681626.1 | mRNA | downstream | 19325 | 325637 ~ 329837 (+) | True | LOC103032759 |
| XM_022681628.1 | mRNA | downstream | 25818 | 332130 ~ 341442 (+) | True | LOC103042564 |
| TU246214 | other | upstream | 13837 | 282076 ~ 286281 (+) | True | G181801 |
| TU246212 | other | upstream | 21945 | 276671 ~ 278173 (+) | True | G181799 |
| TU246178 | other | upstream | 100122 | 191957 ~ 199996 (+) | True | G181779 |
| TU246236 | other | downstream | 85302 | 391614 ~ 392130 (+) | True | G181818 |
| TU246772 | other | downstream | 2151982 | 2458294 ~ 2460322 (+) | False | LOC103029952 |
| TU246773 | other | downstream | 2219457 | 2525769 ~ 2569294 (+) | True | LOC111195173 |
| TU246909 | other | downstream | 2950055 | 3256367 ~ 3258850 (+) | True | G182356 |
| TU246914 | other | downstream | 2981626 | 3287938 ~ 3290258 (+) | True | G182361 |
