Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU246236 |
| length | 517 |
| RNA type | TUCP |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G181818 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035917.1 |
| NCBI id | CM008320.1 |
| chromosome length | 21661149 |
| location | 391614 ~ 392130 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0050877 | nervous system process | biological_process |
| GO:0007600 | sensory perception | biological_process |
| GO:0007606 | sensory perception of chemical stimulus | biological_process |
| GO:0007608 | sensory perception of smell | biological_process |
| GO:0003008 | system process | biological_process |
| id | description |
|---|---|
| ko04740 | Olfactory transduction |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU246219 | lncRNA | upstream | 1448 | 289010 ~ 390166 (+) | False | LOC111195149 |
| TU246229 | lncRNA | upstream | 58369 | 332580 ~ 333245 (+) | True | G181811 |
| TU246223 | lncRNA | upstream | 85302 | 300118 ~ 306312 (+) | True | LOC111195150 |
| TU246216 | lncRNA | upstream | 99363 | 289010 ~ 292251 (+) | True | LOC111195149 |
| TU246215 | lncRNA | upstream | 108810 | 282369 ~ 282804 (+) | True | G181802 |
| TU246234 | lncRNA | downstream | 40409 | 432539 ~ 433567 (+) | True | G181816 |
| TU246238 | lncRNA | downstream | 52951 | 445081 ~ 445298 (+) | True | G181820 |
| TU246239 | lncRNA | downstream | 100468 | 492598 ~ 500981 (+) | True | G181821 |
| TU246362 | lncRNA | downstream | 237777 | 629907 ~ 663519 (+) | True | G181927 |
| TU246369 | lncRNA | downstream | 283789 | 675919 ~ 676207 (+) | True | G181934 |
| XM_022681628.1 | mRNA | upstream | 50172 | 332130 ~ 341442 (+) | True | LOC103042564 |
| XM_015604221.2 | mRNA | upstream | 61777 | 325636 ~ 329837 (+) | False | LOC103032759 |
| XM_022681626.1 | mRNA | upstream | 61777 | 325637 ~ 329837 (+) | True | LOC103032759 |
| XM_022681627.1 | mRNA | upstream | 62029 | 325636 ~ 329585 (+) | False | LOC103032759 |
| XM_022681624.1 | mRNA | upstream | 76491 | 307677 ~ 315123 (+) | True | LOC103032143 |
| XM_007235683.3 | mRNA | downstream | 71193 | 463323 ~ 475354 (+) | True | bdh2 |
| XM_022681630.1 | mRNA | downstream | 83541 | 475671 ~ 495422 (+) | True | LOC103047018 |
| XM_022681631.1 | mRNA | downstream | 117521 | 509651 ~ 540134 (+) | True | suclg1 |
| XM_007234577.3 | mRNA | downstream | 755968 | 1148098 ~ 1153043 (+) | True | lrrtm1 |
| XM_022681634.1 | mRNA | downstream | 999281 | 1391411 ~ 1411319 (+) | False | LOC103025599 |
| TU246214 | other | upstream | 105333 | 282076 ~ 286281 (+) | True | G181801 |
| TU246212 | other | upstream | 113441 | 276671 ~ 278173 (+) | True | G181799 |
| TU246178 | other | upstream | 191618 | 191957 ~ 199996 (+) | True | G181779 |
| TU246772 | other | downstream | 2066164 | 2458294 ~ 2460322 (+) | False | LOC103029952 |
| TU246773 | other | downstream | 2133639 | 2525769 ~ 2569294 (+) | True | LOC111195173 |
| TU246909 | other | downstream | 2864237 | 3256367 ~ 3258850 (+) | True | G182356 |
| TU246914 | other | downstream | 2895808 | 3287938 ~ 3290258 (+) | True | G182361 |
| TU247191 | other | downstream | 4031783 | 4423913 ~ 4431946 (+) | True | G182577 |
