RNA id: TU246258


Basic Information

Item Value
RNA id TU246258
length 648
RNA type TUCP
GC content 0.45
exon number 4
gene id LOC103026712
representative False

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 45736 ~ 48294 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

ACAAAGGCTCAACAATCTTCAGAAACTCTTCAGAATCGCCTCCATTTCCAGAACCTGAAGTCTACAGAACCTGCAGAATCTTCAGAAACTCCAAAAGTCTCCAGAATCTCCACTATCCGAAGCAGAATGAAGTGCATAGTTGTGTGCGTTTCTTTACTGACGGTCTTCTTCACTCTGGCTGAAGGTATGAGTCTTCATGGGCTGGGTGTAGAACCACGGTGTCGCTGCAGTGGAACCGAAAGCAGACGGATCGGCAAACTGATCGAGAGCATAGAGCTCTTCCCTCCAAACCCCCACTGCAAAGACACTGAGATCATTGCGACATTGAAGAGCAACGGTCAGGAGATCTGTCTGGATCCTAAAGCACCTTgggtcacaaaagtgattgagAAGATTTTGGCCAAACGGTCATCGTAAAGCCCAACTCTCTTCTCGTCCGGCGCGGGACTCCTTAGGGCCTGTGGTCCTTCCATCTTCTTCTGACCCTCACTCTCAAATCAGACAGAGCACTGAGGaggatgattatttttttattcatcagTATTTATATAATATCTATTGTTATTTATTCGTTAATTCTGCATTAATACACAGTGTTTATGTACGGTGTGTAAATATTGTACAAGTTCACACAGTTCTCACACAGGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU246265 lncRNA upstream 44750 92965 ~ 94589 (-) True G181846
TU246272 lncRNA upstream 172527 220742 ~ 262756 (-) True G181853
TU246277 lncRNA upstream 193471 241686 ~ 242173 (-) True G181858
XR_002651497.1 lncRNA upstream 274416 322631 ~ 323782 (-) True LOC111195159
TU246316 lncRNA upstream 346761 394976 ~ 395203 (-) True G181888
XM_022681589.1 mRNA downstream 10328 28644 ~ 35513 (-) True LOC111195164
XM_022681590.1 mRNA downstream 10339 28644 ~ 35502 (-) False LOC111195164
XM_007229290.3 mRNA downstream 34640 8 ~ 11201 (-) True LOC103030254
XM_022681597.1 mRNA upstream 61549 109764 ~ 190741 (-) True LOC103030885
XM_022681608.1 mRNA upstream 61549 109764 ~ 176936 (-) False LOC103030885
XM_022681599.1 mRNA upstream 61549 109764 ~ 176936 (-) False LOC103030885
XM_022681610.1 mRNA upstream 61549 109764 ~ 176935 (-) False LOC103030885
XM_022681609.1 mRNA upstream 61549 109764 ~ 176935 (-) False LOC103030885
TU246326 other upstream 445975 494190 ~ 508014 (-) True cisd2
TU246325 other upstream 453138 501353 ~ 508014 (-) False cisd2
trnai-aau_12 other upstream 1479811 1528026 ~ 1528099 (-) True trnai-aau_12
XR_002651506.1 other upstream 1539037 1587252 ~ 1709924 (-) False LOC103021730
XR_002651509.1 other upstream 3394351 3442566 ~ 3454586 (-) True LOC103039001

Expression Profile