Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU246443 |
| length | 592 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 3 |
| gene id | LOC111195170 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035917.1 |
| NCBI id | CM008320.1 |
| chromosome length | 21661149 |
| location | 1547201 ~ 1554782 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU246448 | lncRNA | upstream | 2519 | 1547201 ~ 1549028 (+) | True | LOC111195170 |
| TU246429 | lncRNA | upstream | 173328 | 1375197 ~ 1378219 (+) | True | G181982 |
| TU246428 | lncRNA | upstream | 173328 | 1376360 ~ 1378219 (+) | False | G181982 |
| TU246395 | lncRNA | upstream | 627369 | 918330 ~ 924178 (+) | True | G181955 |
| TU246392 | lncRNA | upstream | 628918 | 915260 ~ 922629 (+) | False | LOC103046702 |
| TU246475 | lncRNA | downstream | 819 | 1555601 ~ 1555846 (+) | True | G182006 |
| TU246482 | lncRNA | downstream | 35172 | 1589954 ~ 1592276 (+) | True | G182012 |
| TU246486 | lncRNA | downstream | 40995 | 1595777 ~ 1596627 (+) | True | G182016 |
| TU246748 | lncRNA | downstream | 181976 | 1736758 ~ 1737124 (+) | True | G182226 |
| TU246751 | lncRNA | downstream | 206074 | 1760856 ~ 1761176 (+) | True | G182229 |
| XM_022681652.1 | mRNA | upstream | 7186 | 1529116 ~ 1544361 (+) | True | LOC103023290 |
| XM_022681651.1 | mRNA | upstream | 24147 | 1518679 ~ 1527400 (+) | True | exosc9 |
| XM_022681649.1 | mRNA | upstream | 34199 | 1447704 ~ 1517348 (+) | False | LOC103024236 |
| XM_022681660.1 | mRNA | downstream | 12158 | 1566940 ~ 1570671 (+) | True | LOC111195172 |
| XM_022681659.1 | mRNA | downstream | 13306 | 1568088 ~ 1570670 (+) | False | LOC111195172 |
| XM_007229270.3 | mRNA | downstream | 17160 | 1571942 ~ 1575056 (+) | True | LOC103022979 |
| XM_022681658.1 | mRNA | downstream | 24461 | 1579243 ~ 1582834 (+) | True | LOC111195171 |
| XM_007229261.2 | mRNA | downstream | 559001 | 2113783 ~ 2122581 (+) | True | frg1 |
| TU246236 | other | upstream | 1159417 | 391614 ~ 392130 (+) | True | G181818 |
| TU246214 | other | upstream | 1265266 | 282076 ~ 286281 (+) | True | G181801 |
| TU246212 | other | upstream | 1273374 | 276671 ~ 278173 (+) | True | G181799 |
| TU246178 | other | upstream | 1351551 | 191957 ~ 199996 (+) | True | G181779 |
| TU246772 | other | downstream | 903512 | 2458294 ~ 2460322 (+) | False | LOC103029952 |
| TU246773 | other | downstream | 970987 | 2525769 ~ 2569294 (+) | True | LOC111195173 |
| TU246909 | other | downstream | 1701585 | 3256367 ~ 3258850 (+) | True | G182356 |
| TU246914 | other | downstream | 1733156 | 3287938 ~ 3290258 (+) | True | G182361 |
| TU247191 | other | downstream | 2869131 | 4423913 ~ 4431946 (+) | True | G182577 |
