Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_002651508.1 |
| length | 817 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 4 |
| gene id | LOC111195174 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035917.1 |
| NCBI id | CM008320.1 |
| chromosome length | 21661149 |
| location | 3168736 ~ 3190142 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU246973 | lncRNA | downstream | 133229 | 3025175 ~ 3035507 (-) | True | G182404 |
| TU246869 | lncRNA | downstream | 369578 | 2791274 ~ 2799158 (-) | True | G182329 |
| TU246814 | lncRNA | downstream | 590006 | 2578470 ~ 2578730 (-) | True | G182281 |
| TU246801 | lncRNA | downstream | 657617 | 2490408 ~ 2511119 (-) | True | G182273 |
| TU246766 | lncRNA | downstream | 1046158 | 2113574 ~ 2122578 (-) | True | G182244 |
| TU246996 | lncRNA | upstream | 40746 | 3230888 ~ 3268887 (-) | True | G182423 |
| TU246995 | lncRNA | upstream | 75000 | 3265142 ~ 3294956 (-) | False | G182423 |
| XR_453051.2 | lncRNA | upstream | 78844 | 3268986 ~ 3282130 (-) | False | LOC103042415 |
| XR_001518279.2 | lncRNA | upstream | 78844 | 3268986 ~ 3282130 (-) | True | LOC103042415 |
| TU247043 | lncRNA | upstream | 174270 | 3364412 ~ 3424861 (-) | True | G182467 |
| XM_007243336.3 | mRNA | downstream | 11228 | 3148161 ~ 3157508 (-) | False | tlr3 |
| XM_007243335.3 | mRNA | downstream | 11229 | 3148161 ~ 3157507 (-) | True | tlr3 |
| XM_022682129.1 | mRNA | downstream | 507510 | 2566363 ~ 2661226 (-) | True | LOC103028260 |
| XM_022681657.1 | mRNA | downstream | 1458812 | 1585495 ~ 1709924 (-) | False | LOC103021730 |
| XM_007232798.3 | mRNA | upstream | 111278 | 3301420 ~ 3306306 (-) | True | ankrd37 |
| XM_007232796.3 | mRNA | upstream | 147689 | 3337831 ~ 3341350 (-) | True | LOC103040979 |
| XM_007232801.3 | mRNA | upstream | 195423 | 3385565 ~ 3389256 (-) | True | helt |
| XM_022681683.1 | mRNA | upstream | 914679 | 4104821 ~ 4155603 (-) | True | pcdh10 |
| XM_022681684.1 | mRNA | upstream | 914679 | 4104821 ~ 4155602 (-) | False | pcdh10 |
| XR_002651506.1 | other | downstream | 1458812 | 1587252 ~ 1709924 (-) | False | LOC103021730 |
| trnai-aau_12 | other | downstream | 1640637 | 1528026 ~ 1528099 (-) | True | trnai-aau_12 |
| TU246326 | other | downstream | 2660722 | 494190 ~ 508014 (-) | True | cisd2 |
| TU246325 | other | downstream | 2660722 | 501353 ~ 508014 (-) | False | cisd2 |
| TU246258 | other | downstream | 3120521 | 45841 ~ 48215 (-) | False | LOC103026712 |
| XR_002651509.1 | other | upstream | 252424 | 3442566 ~ 3454586 (-) | True | LOC103039001 |
| TU247085 | other | upstream | 357491 | 3547633 ~ 3550413 (-) | True | G182501 |
| TU247548 | other | upstream | 1990381 | 5180523 ~ 5213151 (-) | False | G182810 |
| TU247634 | other | upstream | 2095846 | 5285988 ~ 5295716 (-) | False | LOC111195184 |
| TU247875 | other | upstream | 2921228 | 6111370 ~ 6113092 (-) | True | G183043 |
