RNA id: trnai-aau_13


Basic Information

Item Value
RNA id trnai-aau_13
length 73
RNA type tRNA
GC content 0.60
exon number 1
gene id trnai-aau_13
representative True

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 5175836 ~ 5175908 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

GGCCGGTTAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGTACGGCCa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU247421 lncRNA upstream 138228 5036210 ~ 5037608 (+) True G182730
TU247370 lncRNA upstream 206158 4967011 ~ 4969678 (+) True G182703
TU247348 lncRNA upstream 286493 4885736 ~ 4889343 (+) True G182690
TU247323 lncRNA upstream 323775 4851503 ~ 4852061 (+) True G182674
TU247322 lncRNA upstream 324393 4850587 ~ 4851443 (+) True G182673
TU247453 lncRNA downstream 106440 5282348 ~ 5339331 (+) True G182752
TU247512 lncRNA downstream 251441 5427349 ~ 5427850 (+) True G182791
TU247694 lncRNA downstream 317934 5493842 ~ 5498366 (+) True G182907
TU247700 lncRNA downstream 367518 5543426 ~ 5559507 (+) True G182911
TU247732 lncRNA downstream 533744 5709652 ~ 5710340 (+) True G182941
XM_022681703.1 mRNA upstream 35560 5116517 ~ 5140276 (+) True mttp
XM_022681701.1 mRNA upstream 70497 5080398 ~ 5105339 (+) True LOC103028729
XM_015603191.2 mRNA upstream 144155 4995777 ~ 5031681 (+) True LOC103028516
XM_022681700.1 mRNA upstream 144155 4995777 ~ 5031681 (+) False LOC103028516
XM_022681696.1 mRNA upstream 194440 4971104 ~ 4981396 (+) True LOC103030219
XM_022681709.1 mRNA downstream 39002 5214910 ~ 5229596 (+) True LOC103023997
XM_022681706.1 mRNA downstream 54872 5230780 ~ 5250916 (+) True tdrd7
XM_022681708.1 mRNA downstream 55086 5230994 ~ 5250916 (+) False tdrd7
XM_022681707.1 mRNA downstream 55401 5231309 ~ 5250916 (+) False tdrd7
XM_022681710.1 mRNA downstream 76783 5252691 ~ 5277721 (+) True tmod1
TU247365 other upstream 234706 4935608 ~ 4941130 (+) False LOC103029349
TU247191 other upstream 743890 4423913 ~ 4431946 (+) True G182577
TU246914 other upstream 1885578 3287938 ~ 3290258 (+) True G182361
TU246909 other upstream 1916986 3256367 ~ 3258850 (+) True G182356
TU246773 other upstream 2606542 2525769 ~ 2569294 (+) True LOC111195173
trnai-aau_14 other downstream 30178 5206086 ~ 5206159 (+) True trnai-aau_14
TU247511 other downstream 250959 5426867 ~ 5427255 (+) True G182790
trnap-agg_6 other downstream 669523 5845431 ~ 5845502 (+) True trnap-agg_6
TU247815 other downstream 866780 6042688 ~ 6048474 (+) True G183001
TU247933 other downstream 1317754 6493662 ~ 6498192 (+) False rnf38

Expression Profile