RNA id: TU257367


Basic Information

Item Value
RNA id TU257367
length 483
lncRNA type inter_gene
GC content 0.54
exon number 2
gene id G189841
representative True

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 14812998 ~ 14815031 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

tcagagggagcaaaattggccccaggggcgccgagtggtccagcggtctaaagcgctgccactatgagcaggaggtcgccggttcgaacccctgctcatgcagctttgccatcaagctgtcagcgttagagggagcagaattggccctgctccctctgggtgggtagatggcgctctctccccacatcactcctatggtgatgtctgcagcacagggcgtctgtgagctgatgtaccagagccgaggcgctgtgctttcctccaagcgcgctggctgctcggcaatgctgcatcggcagcagctcgaaaagaagcggtggctgacttcacatgtatcggaggaagcatgtgttagtcttcaccctcctggtgtggtgaggtatcactagtgatagggggagtcctaatgaatgggttgggtaattggccgtgtaaattggggagaaaatgggaaaaattagaaataaaattataaaaaaaaaa

Function

GO: NA

KEGG:

id description
ko05322 Systemic lupus erythematosus
ko05034 Alcoholism

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU257362 lncRNA downstream 7126 14797593 ~ 14805872 (-) True G189837
TU257346 lncRNA downstream 13370 14717436 ~ 14799628 (-) True G189823
TU257360 lncRNA downstream 30098 14780548 ~ 14782900 (-) True G189835
TU257357 lncRNA downstream 52624 14759788 ~ 14760374 (-) True G189834
TU257344 lncRNA downstream 99265 14712883 ~ 14713733 (-) True G189821
TU257371 lncRNA upstream 10804 14825835 ~ 14830306 (-) True G189845
TU257372 lncRNA upstream 27545 14842576 ~ 14844243 (-) True G189846
TU257378 lncRNA upstream 51390 14866421 ~ 14867739 (-) True G189852
TU257393 lncRNA upstream 91145 14906176 ~ 14914065 (-) True G189867
TU257499 lncRNA upstream 224950 15039981 ~ 15041242 (-) True G189951
XM_007248313.3 mRNA downstream 17247 14786322 ~ 14795751 (-) True LOC103039903
XM_007248310.3 mRNA downstream 34657 14767313 ~ 14778341 (-) True LOC103039087
XM_022682440.1 mRNA downstream 48643 14754376 ~ 14764355 (-) False LOC103038772
XM_007248315.3 mRNA upstream 32091 14847122 ~ 14856386 (-) True LOC103040538
XM_022682438.1 mRNA upstream 139106 14954137 ~ 14955419 (-) True LOC111195383
XM_007248429.2 mRNA upstream 158547 14973578 ~ 14984895 (-) True LOC103047892
XM_022682833.1 mRNA upstream 217242 15032273 ~ 15033061 (-) True fndc11
XM_022682421.1 mRNA upstream 226644 15041675 ~ 15054177 (-) True LOC103021615
XR_002651608.1 other downstream 1736482 13062935 ~ 13076516 (-) False tsen2
TU256647 other downstream 2193432 12614912 ~ 12619566 (-) True G189335
TU256382 other downstream 2467616 12332545 ~ 12345382 (-) False mapkapk3
TU256229 other downstream 2768705 12043913 ~ 12044293 (-) True G189055
TU256039 other downstream 3821604 10990817 ~ 10991394 (-) True G188898
TU257791 other upstream 503613 15318644 ~ 15322171 (-) False LOC103024926
TU257808 other upstream 616636 15431667 ~ 15457265 (-) False LOC103026676
TU258141 other upstream 1587760 16402791 ~ 16460928 (-) True G190405
XR_002651612.1 other upstream 2018819 16833850 ~ 16869461 (-) False cass4
TU258706 other upstream 2373634 17188665 ~ 17193747 (-) False irf6

Expression Profile