Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU257807 |
| length | 272 |
| lncRNA type | read_through |
| GC content | 0.28 |
| exon number | 2 |
| gene id | G190183 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035918.1 |
| NCBI id | CM008321.1 |
| chromosome length | 32506130 |
| location | 15388095 ~ 15451570 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | description |
|---|---|
| ko00310 | Lysine degradation |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU257794 | lncRNA | downstream | 33463 | 15353437 ~ 15354632 (-) | True | G190171 |
| TU257566 | lncRNA | downstream | 103380 | 15209617 ~ 15284715 (-) | True | G190001 |
| TU257569 | lncRNA | downstream | 170745 | 15215638 ~ 15217350 (-) | True | G190004 |
| TU257549 | lncRNA | downstream | 185329 | 15198426 ~ 15202766 (-) | True | G189987 |
| TU257514 | lncRNA | downstream | 191036 | 15059956 ~ 15197059 (-) | True | G189958 |
| TU257841 | lncRNA | upstream | 104951 | 15556521 ~ 15569271 (-) | True | G190199 |
| TU257848 | lncRNA | upstream | 145757 | 15597327 ~ 15605977 (-) | False | G190204 |
| TU257846 | lncRNA | upstream | 154146 | 15605716 ~ 15607905 (-) | True | G190204 |
| TU257868 | lncRNA | upstream | 266529 | 15718099 ~ 15798757 (-) | True | G190214 |
| TU257894 | lncRNA | upstream | 339155 | 15790725 ~ 15866179 (-) | False | G190232 |
| XM_007239905.3 | mRNA | downstream | 65920 | 15318643 ~ 15322175 (-) | True | LOC103024926 |
| XM_022682441.1 | mRNA | downstream | 82888 | 15296659 ~ 15305207 (-) | True | LOC103025355 |
| XM_022682834.1 | mRNA | downstream | 105516 | 15236982 ~ 15282579 (-) | True | LOC111195446 |
| XM_022682433.1 | mRNA | downstream | 225334 | 15134775 ~ 15162761 (-) | True | LOC107197607 |
| XM_022682426.1 | mRNA | downstream | 257626 | 15103637 ~ 15130469 (-) | False | LOC103042998 |
| XM_022682447.1 | mRNA | upstream | 16643 | 15468213 ~ 15503648 (-) | True | LOC103034615 |
| XM_022682448.1 | mRNA | upstream | 16643 | 15468213 ~ 15501207 (-) | False | LOC103034615 |
| XM_022682449.1 | mRNA | upstream | 16643 | 15468213 ~ 15486815 (-) | False | LOC103034615 |
| XM_022682446.1 | mRNA | upstream | 16643 | 15468213 ~ 15485646 (-) | False | LOC103034615 |
| XM_022682445.1 | mRNA | upstream | 44140 | 15495710 ~ 15504391 (-) | True | rbm12 |
| TU257791 | other | downstream | 65924 | 15318644 ~ 15322171 (-) | False | LOC103024926 |
| XR_002651608.1 | other | downstream | 2311579 | 13062935 ~ 13076516 (-) | False | tsen2 |
| TU256647 | other | downstream | 2768529 | 12614912 ~ 12619566 (-) | True | G189335 |
| TU256382 | other | downstream | 3042713 | 12332545 ~ 12345382 (-) | False | mapkapk3 |
| TU256229 | other | downstream | 3343802 | 12043913 ~ 12044293 (-) | True | G189055 |
| TU258141 | other | upstream | 951221 | 16402791 ~ 16460928 (-) | True | G190405 |
| XR_002651612.1 | other | upstream | 1382280 | 16833850 ~ 16869461 (-) | False | cass4 |
| TU258706 | other | upstream | 1737095 | 17188665 ~ 17193747 (-) | False | irf6 |
| TU258703 | other | upstream | 1765751 | 17217321 ~ 17219780 (-) | True | G190788 |
| TU258917 | other | upstream | 2687793 | 18139363 ~ 18213530 (-) | False | mrpl20 |
