Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU258175 |
| length | 234 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 2 |
| gene id | G190435 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035918.1 |
| NCBI id | CM008321.1 |
| chromosome length | 32506130 |
| location | 16705878 ~ 16722660 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU258173 | lncRNA | downstream | 19256 | 16686156 ~ 16686622 (-) | True | G190433 |
| TU258170 | lncRNA | downstream | 47384 | 16658221 ~ 16658494 (-) | True | G190430 |
| TU258166 | lncRNA | downstream | 128233 | 16569628 ~ 16577645 (-) | False | ptpdc1 |
| XR_002651610.1 | lncRNA | downstream | 139873 | 16560501 ~ 16566005 (-) | True | LOC111195385 |
| TU258159 | lncRNA | downstream | 140252 | 16526885 ~ 16565626 (-) | False | G190420 |
| TU258189 | lncRNA | upstream | 70220 | 16792880 ~ 16793587 (-) | True | G190444 |
| TU258192 | lncRNA | upstream | 96141 | 16818801 ~ 16819610 (-) | True | G190446 |
| TU258196 | lncRNA | upstream | 114963 | 16837623 ~ 16944365 (-) | False | G190449 |
| TU258195 | lncRNA | upstream | 157848 | 16880508 ~ 16897083 (-) | False | G190449 |
| TU258198 | lncRNA | upstream | 157848 | 16880508 ~ 16944365 (-) | True | G190449 |
| XM_022682463.1 | mRNA | downstream | 106561 | 16569623 ~ 16599317 (-) | True | ptpdc1 |
| XM_022682467.1 | mRNA | downstream | 149120 | 16520544 ~ 16556758 (-) | True | wnt7a |
| XM_022682469.1 | mRNA | downstream | 567585 | 15869135 ~ 16138293 (-) | False | LOC103029523 |
| XM_022682468.1 | mRNA | downstream | 567585 | 15869135 ~ 16138293 (-) | True | LOC103029523 |
| XM_022682459.1 | mRNA | downstream | 854687 | 15846861 ~ 15851191 (-) | True | LOC103030277 |
| XM_022682461.1 | mRNA | upstream | 16627 | 16739287 ~ 16794230 (-) | False | phf2 |
| XM_022682462.1 | mRNA | upstream | 16627 | 16739287 ~ 16794230 (-) | False | phf2 |
| XM_022682460.1 | mRNA | upstream | 16627 | 16739287 ~ 16794230 (-) | True | phf2 |
| XM_022682837.1 | mRNA | upstream | 74208 | 16796868 ~ 16827437 (-) | True | fam120a |
| XM_022682470.1 | mRNA | upstream | 111190 | 16833850 ~ 16869461 (-) | True | cass4 |
| TU258141 | other | downstream | 244950 | 16402791 ~ 16460928 (-) | True | G190405 |
| TU257808 | other | downstream | 1248613 | 15431667 ~ 15457265 (-) | False | LOC103026676 |
| TU257791 | other | downstream | 1383707 | 15318644 ~ 15322171 (-) | False | LOC103024926 |
| XR_002651608.1 | other | downstream | 3629362 | 13062935 ~ 13076516 (-) | False | tsen2 |
| TU256647 | other | downstream | 4086312 | 12614912 ~ 12619566 (-) | True | G189335 |
| XR_002651612.1 | other | upstream | 111190 | 16833850 ~ 16869461 (-) | False | cass4 |
| TU258706 | other | upstream | 466005 | 17188665 ~ 17193747 (-) | False | irf6 |
| TU258703 | other | upstream | 494661 | 17217321 ~ 17219780 (-) | True | G190788 |
| TU258917 | other | upstream | 1416703 | 18139363 ~ 18213530 (-) | False | mrpl20 |
| XR_002651616.1 | other | upstream | 1444758 | 18167418 ~ 18175117 (-) | False | LOC111195395 |
