Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU259123 |
| length | 559 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 2 |
| gene id | LOC111195399 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035918.1 |
| NCBI id | CM008321.1 |
| chromosome length | 32506130 |
| location | 18708319 ~ 18798915 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU259169 | lncRNA | downstream | 5171 | 18703405 ~ 18706063 (-) | True | LOC111195398 |
| XR_002651618.1 | lncRNA | downstream | 5214 | 18703411 ~ 18706020 (-) | False | LOC111195398 |
| TU259155 | lncRNA | downstream | 35828 | 18671463 ~ 18675406 (-) | True | G191078 |
| TU259003 | lncRNA | downstream | 205859 | 18502502 ~ 18505375 (-) | True | G191025 |
| TU258978 | lncRNA | downstream | 333040 | 18377640 ~ 18378194 (-) | True | G191003 |
| TU259151 | lncRNA | upstream | 605 | 18748963 ~ 18778171 (-) | False | G191074 |
| TU259149 | lncRNA | upstream | 1681 | 18750039 ~ 18798915 (-) | False | LOC111195399 |
| TU259135 | lncRNA | upstream | 10635 | 18758993 ~ 18774317 (-) | False | LOC111195399 |
| TU259150 | lncRNA | upstream | 14608 | 18762966 ~ 18778171 (-) | True | G191074 |
| TU259152 | lncRNA | upstream | 27294 | 18775652 ~ 18788885 (-) | True | G191075 |
| XM_007256676.3 | mRNA | downstream | 219786 | 18488677 ~ 18491448 (-) | True | LOC103038294 |
| XM_022682536.1 | mRNA | downstream | 222657 | 18483415 ~ 18488577 (-) | True | LOC103029431 |
| XM_007256677.3 | mRNA | downstream | 244182 | 18456589 ~ 18467052 (-) | True | LOC103038600 |
| XM_022682534.1 | mRNA | downstream | 260527 | 18434535 ~ 18450707 (-) | True | nckipsd |
| XM_015607725.2 | mRNA | downstream | 282506 | 18417224 ~ 18428728 (-) | True | slc25a20 |
| XM_007234443.3 | mRNA | upstream | 51571 | 18799929 ~ 18844551 (-) | True | cacna2d2 |
| XM_022682542.1 | mRNA | upstream | 51571 | 18799929 ~ 18836162 (-) | False | cacna2d2 |
| XM_007234445.3 | mRNA | upstream | 101542 | 18849900 ~ 18861224 (-) | True | acy1 |
| XM_022682543.1 | mRNA | upstream | 101542 | 18849900 ~ 18861099 (-) | False | acy1 |
| XM_007234444.3 | mRNA | upstream | 114207 | 18862565 ~ 18870053 (-) | True | abhd14a |
| TU258958 | other | downstream | 396125 | 18311506 ~ 18315109 (-) | False | LOC103041510 |
| TU258917 | other | downstream | 497704 | 18139363 ~ 18213530 (-) | False | mrpl20 |
| XR_002651616.1 | other | downstream | 536117 | 18167418 ~ 18175117 (-) | False | LOC111195395 |
| TU258703 | other | downstream | 1491454 | 17217321 ~ 17219780 (-) | True | G190788 |
| TU258706 | other | downstream | 1517487 | 17188665 ~ 17193747 (-) | False | irf6 |
| TU259248 | other | upstream | 149151 | 18897509 ~ 18902257 (-) | True | LOC103032794 |
| XR_002651627.1 | other | upstream | 2759694 | 21508052 ~ 21508261 (-) | True | LOC111195406 |
| XR_002651626.1 | other | upstream | 2762566 | 21510924 ~ 21544831 (-) | False | elmo2 |
| TU260340 | other | upstream | 3098611 | 21846969 ~ 21851642 (-) | False | G191862 |
| TU260341 | other | upstream | 3098611 | 21846969 ~ 21851642 (-) | True | G191862 |
