Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_002651619.1 |
| length | 345 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 4 |
| gene id | LOC111195399 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035918.1 |
| NCBI id | CM008321.1 |
| chromosome length | 32506130 |
| location | 18708319 ~ 18798915 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU259151 | lncRNA | downstream | 8047 | 18748963 ~ 18778171 (-) | False | G191074 |
| TU259150 | lncRNA | downstream | 8047 | 18762966 ~ 18778171 (-) | True | G191074 |
| TU259139 | lncRNA | downstream | 11901 | 18708319 ~ 18774317 (-) | False | LOC111195399 |
| TU259135 | lncRNA | downstream | 11901 | 18758993 ~ 18774317 (-) | False | LOC111195399 |
| TU259156 | lncRNA | downstream | 34192 | 18732558 ~ 18752026 (-) | True | G191079 |
| TU259459 | lncRNA | upstream | 246663 | 19045406 ~ 19099824 (-) | True | G191296 |
| TU259491 | lncRNA | upstream | 396184 | 19194927 ~ 19196386 (-) | True | G191321 |
| TU259559 | lncRNA | upstream | 429991 | 19228734 ~ 19229174 (-) | True | G191326 |
| TU259560 | lncRNA | upstream | 430152 | 19228895 ~ 19229174 (-) | False | G191326 |
| TU259562 | lncRNA | upstream | 450461 | 19249204 ~ 19249453 (-) | True | G191328 |
| XM_007256676.3 | mRNA | downstream | 294770 | 18488677 ~ 18491448 (-) | True | LOC103038294 |
| XM_022682536.1 | mRNA | downstream | 297641 | 18483415 ~ 18488577 (-) | True | LOC103029431 |
| XM_007256677.3 | mRNA | downstream | 319166 | 18456589 ~ 18467052 (-) | True | LOC103038600 |
| XM_022682534.1 | mRNA | downstream | 335511 | 18434535 ~ 18450707 (-) | True | nckipsd |
| XM_015607725.2 | mRNA | downstream | 357490 | 18417224 ~ 18428728 (-) | True | slc25a20 |
| XM_007234443.3 | mRNA | upstream | 1186 | 18799929 ~ 18844551 (-) | True | cacna2d2 |
| XM_022682542.1 | mRNA | upstream | 1186 | 18799929 ~ 18836162 (-) | False | cacna2d2 |
| XM_007234445.3 | mRNA | upstream | 51157 | 18849900 ~ 18861224 (-) | True | acy1 |
| XM_022682543.1 | mRNA | upstream | 51157 | 18849900 ~ 18861099 (-) | False | acy1 |
| XM_007234444.3 | mRNA | upstream | 63822 | 18862565 ~ 18870053 (-) | True | abhd14a |
| TU259141 | other | downstream | 22790 | 18711234 ~ 18763428 (-) | False | LOC111195399 |
| TU259137 | other | downstream | 57422 | 18709030 ~ 18728796 (-) | False | LOC111195399 |
| TU258958 | other | downstream | 471109 | 18311506 ~ 18315109 (-) | False | LOC103041510 |
| TU258917 | other | downstream | 572688 | 18139363 ~ 18213530 (-) | False | mrpl20 |
| TU259248 | other | upstream | 98766 | 18897509 ~ 18902257 (-) | True | LOC103032794 |
| XR_002651627.1 | other | upstream | 2709309 | 21508052 ~ 21508261 (-) | True | LOC111195406 |
| XR_002651626.1 | other | upstream | 2712181 | 21510924 ~ 21544831 (-) | False | elmo2 |
| TU260340 | other | upstream | 3048226 | 21846969 ~ 21851642 (-) | False | G191862 |
| TU260341 | other | upstream | 3048226 | 21846969 ~ 21851642 (-) | True | G191862 |
