Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_007254551.3 |
| length | 1212 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 3 |
| gene id | brk1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035918.1 |
| NCBI id | CM008321.1 |
| chromosome length | 32506130 |
| location | 21099347 ~ 21103218 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0048870 | cell motility | biological_process |
| GO:0008284 | positive regulation of cell population proliferation | biological_process |
| GO:0030036 | actin cytoskeleton organization | biological_process |
| GO:0001701 | in utero embryonic development | biological_process |
| GO:0005856 | cytoskeleton | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| id | description |
|---|---|
| K05752 | C3ORF10, HSPC300; chromosome 3 open reading frame 10 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU260058 | lncRNA | downstream | 7112 | 21091820 ~ 21092235 (-) | True | G191653 |
| TU260052 | lncRNA | downstream | 141791 | 20956989 ~ 20957556 (-) | True | G191647 |
| TU259895 | lncRNA | downstream | 573666 | 20493310 ~ 20525681 (-) | True | G191557 |
| TU259838 | lncRNA | downstream | 827424 | 20269621 ~ 20271923 (-) | True | G191518 |
| TU259818 | lncRNA | downstream | 856174 | 20181887 ~ 20243173 (-) | True | G191507 |
| TU260076 | lncRNA | upstream | 2222 | 21105440 ~ 21106822 (-) | True | G191664 |
| TU260104 | lncRNA | upstream | 70254 | 21173472 ~ 21239522 (-) | True | G191691 |
| TU260215 | lncRNA | upstream | 175785 | 21279003 ~ 21279752 (-) | True | G191787 |
| TU260224 | lncRNA | upstream | 200300 | 21303518 ~ 21370779 (-) | True | G191791 |
| TU260257 | lncRNA | upstream | 326802 | 21430020 ~ 21436453 (-) | True | npff |
| XM_022682601.1 | mRNA | downstream | 2107 | 21093650 ~ 21097240 (-) | True | LOC103031955 |
| XM_022682600.1 | mRNA | downstream | 26929 | 20837118 ~ 21072418 (-) | True | itpr1 |
| XM_007254553.3 | mRNA | downstream | 277823 | 20816597 ~ 20821524 (-) | True | bhlhe40 |
| XM_007254552.3 | mRNA | downstream | 291896 | 20795413 ~ 20807451 (-) | True | LOC103032600 |
| XM_022682596.1 | mRNA | downstream | 476853 | 20502308 ~ 20622494 (-) | False | LOC103041184 |
| XM_015607177.2 | mRNA | upstream | 9262 | 21112480 ~ 21114923 (-) | True | gpx1 |
| XM_007248356.3 | mRNA | upstream | 239484 | 21342702 ~ 21348384 (-) | True | LOC103026802 |
| XM_007248360.3 | mRNA | upstream | 309471 | 21412689 ~ 21428618 (-) | False | LOC103027815 |
| XM_007248359.3 | mRNA | upstream | 309471 | 21412689 ~ 21428618 (-) | True | LOC103027815 |
| XM_022682851.1 | mRNA | upstream | 326798 | 21430016 ~ 21433834 (-) | False | npff |
| TU259248 | other | downstream | 2197090 | 18897509 ~ 18902257 (-) | True | LOC103032794 |
| TU259141 | other | downstream | 2335919 | 18711234 ~ 18763428 (-) | False | LOC111195399 |
| TU259137 | other | downstream | 2370551 | 18709030 ~ 18728796 (-) | False | LOC111195399 |
| TU258958 | other | downstream | 2784238 | 18311506 ~ 18315109 (-) | False | LOC103041510 |
| XR_002651616.1 | other | downstream | 2924230 | 18167418 ~ 18175117 (-) | False | LOC111195395 |
| XR_002651627.1 | other | upstream | 404834 | 21508052 ~ 21508261 (-) | True | LOC111195406 |
| XR_002651626.1 | other | upstream | 407706 | 21510924 ~ 21544831 (-) | False | elmo2 |
| TU260340 | other | upstream | 743751 | 21846969 ~ 21851642 (-) | False | G191862 |
| TU260341 | other | upstream | 743751 | 21846969 ~ 21851642 (-) | True | G191862 |
| XR_002651628.1 | other | upstream | 1246129 | 22349347 ~ 22362457 (-) | True | alas1 |
