RNA id: TU261672



Basic Information


Item Value
RNA id TU261672
length 206
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G192822
representative True

Chromosome Information


Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 25362531 ~ 25362736 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


cagatgcgccagcaagacgtgcaccaacaatttgtcctcttttgaactctggtatgtcacccataatgttgtgtgcattgcaatattttgagcaaaactgtgctcttaccctgctaattgaaccttcacactctgctcttactagtgcaatgtgcaattaatgaagattggccaccaggctgctccaatttagccatgaaacctcc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU261671 lncRNA downstream 98537 25263039 ~ 25263994 (-) True G192821
TU261647 lncRNA downstream 170471 25190093 ~ 25192060 (-) True G192806
TU261586 lncRNA downstream 398741 24962509 ~ 24963790 (-) True G192763
TU261581 lncRNA downstream 452502 24909809 ~ 24910029 (-) True G192758
TU261580 lncRNA downstream 457186 24905140 ~ 24905345 (-) True G192757
TU261726 lncRNA upstream 88532 25451268 ~ 25451654 (-) True G192869
TU261728 lncRNA upstream 95677 25458413 ~ 25458628 (-) True G192871
TU261751 lncRNA upstream 139767 25502503 ~ 25503530 (-) True G192887
XR_002651634.1 lncRNA upstream 177286 25540022 ~ 25542358 (-) True LOC111195414
TU261757 lncRNA upstream 216127 25578863 ~ 25580309 (-) True G192892
XM_007247766.3 mRNA downstream 8054 25235114 ~ 25354477 (-) False lrrn2
XM_022682696.1 mRNA downstream 27624 25235114 ~ 25334907 (-) True lrrn2
XM_022682690.1 mRNA downstream 561630 24774039 ~ 24800901 (-) True LOC103045744
XM_022682685.1 mRNA downstream 1078832 24147827 ~ 24283699 (-) True nfasc
XM_022682684.1 mRNA downstream 1256633 24039246 ~ 24105898 (-) True cntn2
XM_022682699.1 mRNA upstream 145752 25508488 ~ 25554659 (-) False LOC103039085
XM_022682697.1 mRNA upstream 157445 25520181 ~ 25554687 (-) False LOC103039085
XM_022682698.1 mRNA upstream 157445 25520181 ~ 25554687 (-) True LOC103039085
XM_022682701.1 mRNA upstream 164906 25527642 ~ 25532853 (-) True LOC103038137
XM_022682700.1 mRNA upstream 168173 25530909 ~ 25537003 (-) False LOC103038137
TU261664 other downstream 144981 25211675 ~ 25217550 (-) True G192815
TU260862 other downstream 2303726 23054633 ~ 23058805 (-) True G192251
TU260753 other downstream 2573576 22786334 ~ 22788955 (-) False LOC103041653
XR_002651631.1 other downstream 2639626 22711022 ~ 22722905 (-) False amhr2
XR_002651628.1 other downstream 3000074 22349347 ~ 22362457 (-) True alas1
TU261852 other upstream 512174 25874910 ~ 25878653 (-) False LOC111195415
TU261855 other upstream 512174 25874910 ~ 25878653 (-) True LOC111195415
TU262021 other upstream 1668927 27031663 ~ 27033089 (-) True G193097
TU262199 other upstream 2062306 27425042 ~ 27476869 (-) False LOC103046149
TU262456 other upstream 2831643 28194379 ~ 28212718 (-) False LOC111195422

Expression Profile