RNA id: TU261914



Basic Information


Item Value
RNA id TU261914
length 275
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G193014
representative True

Chromosome Information


Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 26434508 ~ 26434782 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


cctgtcccactgcgattgcgtctaaatatccactaaagtacgtccaaatttcagtggacgcagtttagtggatatttagtggatatttagacgcaatctggacgtagtttagtggatatttggacggcaccgtccaagtggacgtagtttagacgttgccgtccactttagacgcaaaagtggttttggtacctcccaaaattttcggaatagacggcgactaatatggacgtaatttagtggatatttagacgcagtacGGACGTATTTTAGTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU261905 lncRNA downstream 137279 26227608 ~ 26297229 (-) True G193005
TU261847 lncRNA downstream 555855 25875907 ~ 25878653 (-) False LOC111195415
XR_002651635.1 lncRNA downstream 556926 25877039 ~ 25877582 (-) False LOC111195415
TU261833 lncRNA downstream 576092 25854665 ~ 25858416 (-) True G192955
TU261835 lncRNA downstream 577353 25856383 ~ 25857155 (-) True G192956
TU261917 lncRNA upstream 58421 26493203 ~ 26493562 (-) True G193017
TU261918 lncRNA upstream 142950 26577732 ~ 26577984 (-) True G193018
TU261920 lncRNA upstream 183964 26618746 ~ 26618978 (-) True G193020
TU261939 lncRNA upstream 276471 26711253 ~ 26719418 (-) False fam72a
TU261941 lncRNA upstream 278910 26713692 ~ 26718554 (-) False fam72a
XM_022682717.1 mRNA downstream 84803 26114437 ~ 26349705 (-) True LOC103035733
XM_007247753.3 mRNA downstream 349030 26008796 ~ 26085478 (-) True LOC103036054
XM_022682706.1 mRNA downstream 663789 25587727 ~ 25770719 (-) False ppfia4
XM_007247751.3 mRNA upstream 283295 26718077 ~ 26724106 (-) True fam72a
XM_007247743.3 mRNA upstream 694370 27129152 ~ 27133856 (-) True il10
XM_007247790.3 mRNA upstream 712932 27147714 ~ 27153326 (-) True LOC103047370
XM_007247741.3 mRNA upstream 727965 27162747 ~ 27170995 (-) True prelp
XM_022682725.1 mRNA upstream 762269 27197051 ~ 27210316 (-) False LOC103032351
TU261852 other downstream 555855 25874910 ~ 25878653 (-) False LOC111195415
TU261855 other downstream 555855 25874910 ~ 25878653 (-) True LOC111195415
TU261664 other downstream 1216958 25211675 ~ 25217550 (-) True G192815
TU260862 other downstream 3375703 23054633 ~ 23058805 (-) True G192251
TU260753 other downstream 3645553 22786334 ~ 22788955 (-) False LOC103041653
TU262021 other upstream 596881 27031663 ~ 27033089 (-) True G193097
TU262199 other upstream 990260 27425042 ~ 27476869 (-) False LOC103046149
TU262456 other upstream 1759597 28194379 ~ 28212718 (-) False LOC111195422
TU262454 other upstream 1775242 28210024 ~ 28212718 (-) False LOC111195422
TU262455 other upstream 1775409 28210191 ~ 28213070 (-) True LOC111195422

Expression Profile