Item | Value |
---|---|
RNA id | XM_007247728.3 |
length | 2000 |
RNA type | mRNA |
GC content | 0.54 |
exon number | 12 |
gene id | LOC103028137 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_035918.1 |
NCBI id | CM008321.1 |
chromosome length | 32506130 |
location | 27962367 ~ 28008609 (-) |
genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
species | mexican tetra (Astyanax mexicanus) |
id | name | namespace |
---|---|---|
GO:0000165 | MAPK cascade | biological_process |
GO:0006468 | protein phosphorylation | biological_process |
GO:0005524 | ATP binding | molecular_function |
GO:0004707 | MAP kinase activity | molecular_function |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU262409 | lncRNA | downstream | 226256 | 27735902 ~ 27736111 (-) | True | G193370 |
TU262408 | lncRNA | downstream | 230705 | 27731003 ~ 27731662 (-) | True | G193369 |
TU262406 | lncRNA | downstream | 238262 | 27723860 ~ 27724105 (-) | True | G193367 |
TU262202 | lncRNA | downstream | 455838 | 27488865 ~ 27506529 (-) | True | G193223 |
TU262416 | lncRNA | upstream | 2384 | 28010991 ~ 28015537 (-) | False | tmem167b |
TU262415 | lncRNA | upstream | 2456 | 28011063 ~ 28015537 (-) | False | tmem167b |
TU262418 | lncRNA | upstream | 2456 | 28011063 ~ 28015612 (-) | True | tmem167b |
TU262439 | lncRNA | upstream | 58867 | 28067474 ~ 28067681 (-) | True | G193386 |
TU262468 | lncRNA | upstream | 157234 | 28165841 ~ 28166081 (-) | True | G193411 |
XM_022682740.1 | mRNA | downstream | 7315 | 27911675 ~ 27955052 (-) | False | LOC103045240 |
XM_022682741.1 | mRNA | downstream | 7924 | 27911675 ~ 27954443 (-) | False | LOC103045240 |
XM_022682739.1 | mRNA | downstream | 12063 | 27911675 ~ 27950304 (-) | True | LOC103045240 |
XM_022682742.1 | mRNA | downstream | 18956 | 27911675 ~ 27943411 (-) | False | LOC103045240 |
XM_022682738.1 | mRNA | downstream | 18960 | 27911675 ~ 27943407 (-) | False | LOC103045240 |
XM_022682743.1 | mRNA | upstream | 2453 | 28011060 ~ 28015566 (-) | False | tmem167b |
XM_007247727.2 | mRNA | upstream | 15730 | 28024337 ~ 28028670 (-) | True | b3galt6 |
XM_007247722.3 | mRNA | upstream | 22079 | 28030686 ~ 28048695 (-) | True | LOC103026702 |
XM_022682745.1 | mRNA | upstream | 57275 | 28065882 ~ 28162362 (-) | False | LOC103044609 |
XM_022682744.1 | mRNA | upstream | 57275 | 28065882 ~ 28162362 (-) | False | LOC103044609 |
TU262199 | other | downstream | 485498 | 27425042 ~ 27476869 (-) | False | LOC103046149 |
TU262021 | other | downstream | 929278 | 27031663 ~ 27033089 (-) | True | G193097 |
TU261852 | other | downstream | 2083714 | 25874910 ~ 25878653 (-) | False | LOC111195415 |
TU261855 | other | downstream | 2083714 | 25874910 ~ 25878653 (-) | True | LOC111195415 |
TU261664 | other | downstream | 2744817 | 25211675 ~ 25217550 (-) | True | G192815 |
TU262456 | other | upstream | 185772 | 28194379 ~ 28212718 (-) | False | LOC111195422 |
TU262454 | other | upstream | 201417 | 28210024 ~ 28212718 (-) | False | LOC111195422 |
TU262455 | other | upstream | 201584 | 28210191 ~ 28213070 (-) | True | LOC111195422 |
TU262651 | other | upstream | 567500 | 28576107 ~ 28583747 (-) | False | LOC111195343 |
TU262654 | other | upstream | 567500 | 28576107 ~ 28583747 (-) | False | LOC111195343 |