Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_022682459.1 |
| length | 1180 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 5 |
| gene id | LOC103030277 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035918.1 |
| NCBI id | CM008321.1 |
| chromosome length | 32506130 |
| location | 15846861 ~ 15851191 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0007188 | adenylate cyclase-modulating G protein-coupled receptor signaling pathway | biological_process |
| GO:0006184 | obsolete GTP catabolic process | biological_process |
| GO:0003924 | GTPase activity | molecular_function |
| GO:0005525 | GTP binding | molecular_function |
| GO:0004871 | obsolete signal transducer activity | molecular_function |
| GO:0031683 | G-protein beta/gamma-subunit complex binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU257895 | lncRNA | downstream | 33078 | 15790725 ~ 15813783 (-) | True | G190232 |
| TU257868 | lncRNA | downstream | 48104 | 15718099 ~ 15798757 (-) | True | G190214 |
| TU257846 | lncRNA | downstream | 238956 | 15605716 ~ 15607905 (-) | True | G190204 |
| TU257848 | lncRNA | downstream | 240884 | 15597327 ~ 15605977 (-) | False | G190204 |
| TU257841 | lncRNA | downstream | 277590 | 15556521 ~ 15569271 (-) | True | G190199 |
| TU257909 | lncRNA | upstream | 13125 | 15864316 ~ 15866117 (-) | False | G190232 |
| TU257957 | lncRNA | upstream | 57844 | 15909035 ~ 15909528 (-) | True | G190252 |
| TU257962 | lncRNA | upstream | 115304 | 15966495 ~ 15969045 (-) | True | G190257 |
| TU257973 | lncRNA | upstream | 144005 | 15995196 ~ 16002227 (-) | True | G190265 |
| TU257976 | lncRNA | upstream | 151073 | 16002264 ~ 16043340 (-) | True | G190268 |
| XM_007243528.2 | mRNA | downstream | 13140 | 15832088 ~ 15833721 (-) | True | LOC103047460 |
| XM_007233856.2 | mRNA | downstream | 21622 | 15814220 ~ 15825239 (-) | True | LOC103030908 |
| XM_022682456.1 | mRNA | downstream | 62207 | 15765883 ~ 15784654 (-) | True | acad9 |
| XM_022682455.1 | mRNA | downstream | 85259 | 15723299 ~ 15761602 (-) | False | efcc1 |
| XM_022682454.1 | mRNA | downstream | 86656 | 15723299 ~ 15760205 (-) | True | efcc1 |
| XM_022682469.1 | mRNA | upstream | 17944 | 15869135 ~ 16138293 (-) | False | LOC103029523 |
| XM_022682468.1 | mRNA | upstream | 17944 | 15869135 ~ 16138293 (-) | True | LOC103029523 |
| XM_022682467.1 | mRNA | upstream | 669353 | 16520544 ~ 16556758 (-) | True | wnt7a |
| XM_022682463.1 | mRNA | upstream | 718432 | 16569623 ~ 16599317 (-) | True | ptpdc1 |
| XM_022682461.1 | mRNA | upstream | 888096 | 16739287 ~ 16794230 (-) | False | phf2 |
| TU257808 | other | downstream | 389596 | 15431667 ~ 15457265 (-) | False | LOC103026676 |
| TU257791 | other | downstream | 524690 | 15318644 ~ 15322171 (-) | False | LOC103024926 |
| XR_002651608.1 | other | downstream | 2770345 | 13062935 ~ 13076516 (-) | False | tsen2 |
| TU256647 | other | downstream | 3227295 | 12614912 ~ 12619566 (-) | True | G189335 |
| TU256382 | other | downstream | 3501479 | 12332545 ~ 12345382 (-) | False | mapkapk3 |
| TU258141 | other | upstream | 551600 | 16402791 ~ 16460928 (-) | True | G190405 |
| XR_002651612.1 | other | upstream | 982659 | 16833850 ~ 16869461 (-) | False | cass4 |
| TU258706 | other | upstream | 1337474 | 17188665 ~ 17193747 (-) | False | irf6 |
| TU258703 | other | upstream | 1366130 | 17217321 ~ 17219780 (-) | True | G190788 |
| TU258917 | other | upstream | 2288172 | 18139363 ~ 18213530 (-) | False | mrpl20 |
