RNA id: XM_022682812.1


Basic Information

Item Value
RNA id XM_022682812.1
length 6155
RNA type mRNA
GC content 0.58
exon number 41
gene id adamts9
representative True

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 32099466 ~ 32196761 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

CATCCaccccaatcacacacacacccacacccacccaccccacTCACTCAACCACCCACCCATTCACCCTTCTTTAACGCAGTATGCACGCTGCGCGCGGACTGCGCGAGGCGCTCGGGACATGTGAAGCCGGCCGAACGGCGCGCGGGCAGGACGTTGCTGGACGCCGGCTGGGGGATTAAAGAGGACAGcgggagaaaaggagagaaagacaaGAAGAAGCAACAgagcagagaggaggaggacgagtGAAGGGGGATACTCCACCATGCACGCGCTGCTCTGGGCTGTGCTGTGCGTGCTGCCGGACCTGGCGCGTGCAGTGATCCCGGCGGACTCGAGGAAAGCAGCAACGGCAGCCCCTTCGCACCAGCACTTCAGCGCCTACGAAATTGTGACTCCCGCGCGCGTGGACGAGGCCGGCGAGCCGCTGCCCGCGAGCGCGCACTTCAAACGCAAGAGGCGGAGCGTGGACGCGCCGACGGAGCACGAGCACTGGAGCACGGAGCGCGTGCACTACCGCATCGCCGCCTTCGGCCAGGACTACCGCCTGAACTTGACGCTGGACAGCGGCTTCCTGGCGCCCGCCTACAGCGTCACGGTGCTCGGGCTGGGCGGAGGACGGAACTTcactgaggaagaggaggaggaagaggaggatacGGCGTATCAGCACTGTTTTTACCGGGGACACGTGAACGCGCACGCGGAGCATGCCGCCGTCATCAGCCTCTGCTCCGGTCTGctCGGCACTTTCAGGTCCTCAGAAGGGGAGTATTTCGTGGAGCCCCTTCACAGCTACAACGGGGAAGATTACGCAGAAGAACACATCAAACCTCACATAGTCTACAGAAAAGATGCACAGCACCAAATGCAGAGCGCCAAAGAAGACTCGTCTCCATGCGACTCTTCAGGTCATGAGCAGACACAAAGGGTACAGGGGGGTGCGGAGAAGGGCGGGCCATCTCCCAGCATGCTGTCTGACCTGGAGGCTCTCAGCACGGGGGTTTTCTCTGGCCCCTTTCCCTCGGCGGAAAAGCAGCAGCGCCCGGCTAACGGCAGCAGTGACTCAGGACCTCACCGGAGATCAAAGCGCTTCCTCTCCTACCCGCGCTTCGTGGAAGTCATGGTGGTTGCCGACTCCAAGATGGTGGAACACCACGGGAGCAGCCTTCAGCACTACATTCTTACACTGATGTCTATTGTTTCCTCAATCTACAAGGATCCCAGCATTGGCAACCTGATTAACATTGTTGTGGTGAAGCTGGTCATCATAAACAATGAGCTGGAGGGTCCTGTTATCTCCTTCAATGCACAGTCCACTTTAAAGAACTTCTGTATATGGCAGCAGGGTCAGAACCACCTCGATGACAACCACCACAGCCACCACGACACGGCCATTCTCATCACCAGGCAGGACATCTGTCGAGCCCGAGACAAGTGTGATACGTTAGGTCTTGCGGAGTTAGGCACAGTGTGTGACCCCTACAGAAGCTGCAGCATCAGTGAAGATAATGGTCTCAGTACTGCTTTCACCATTGCTCATGAGCTCGGCCACGTGTTTAACATGCCCCATGACGACAGTAATAAGTGTAAGGAGGATGGGGTTAAGAATCAGCAGCACGTGATGGCCCCCACGCTCAACTACTACACCAACCCCTGGATGTGGTCCAAATGCAGCAGGAAGTACATCACTGAGTTCCTCGACACAGGGTACGGGGAGTGTTTACTCGACGAGCCCGTATCTAGGCCGTACCCGCTGCCCCAGCAGCAGCCTGGACGGATATACAATGTCAATAAGCAATGTGAACTCATATTCGGGCCTGGGACACAGGTGTGCCCATATATGACGCAGTGTCGAAGGCTGTGGTGCACCAGCCCAGAGGGAGCACAGCGTGGATGCCGTACCCAGCACATGCCCTGGGCTGATGGAACCGACTGCGCTCCTGGAAAGCACTGCAAACATGGTCTCTGCATCCCCAAGGAGCATGACTCCACGCCAGTTGAAGGAGCTTGGGGTGTTTGGAGTCCCTTCGGCTCCTGCTCACGTACCTGTGGAGGGGGTATAAAGATCGCCGTGCGGGACTGCAACCGACCCCTGCCCAGGAACGGGGGAAAATACTGCGTGGGGCGAAGGATGAAGTTCCGTTCCTGCAACTCTGAGCCGTGCTCCAAGCAGAACAAAGACTTCCGAGAGGAGCAGTGTGCCACCTTTGACGGACGCCACTTCAACATCAACGGTCTACCTCCCAACGTGCGCTGGGTGCCCAAGTACAGCGGCATTCTTATGAAGGATCGCTGTAAGCTCTTCTGCAGAGTTTCCGGCAGCACAGCCTACTATCAGCTCAGGGACCGCGTCATTGACGGTACTCCATGTGGCCCCGACACCAACGACATATGTGTGCAGGGCCTATGCAGGCAAGCGGGGTGTGACCATGTTTTGAACTCCAAGGCCAGGAGAGATaaatgtggagtgtgtgggggagACAACTCCTCCTGCAAGACAGTGGCAGGCACATTCAACACTGTGAACTATGGTTATAATGTCGTTGTGCGAATCCCCAGTGGTGCTACTAACATCGATGTGCGACAGCACAGCTTCTCAGGAAAACCAGAGGATGATAACTACCTCGCCGTGGCCAACAGTCGTGGAGACTATCTACTCAATGGAGATTTTGTGgtcagcatgtttaaaagggAAATTAAAGTGGGAAACGCCGTTATAGAGTACAGCGGATCTGACCACGTGATCGAGAGACTCAACTGCACTGACCGTATCGAGGAGGAGATCGTAGTGCAGGTGCTATCCGTCGGTAACCTCTACAATCCAGACGTCAGGTATTCCTACAACATTCCCATTGAGGATAAGAGTCAGCAGTTTATCTGGGATGCATACGGCCCGTGGCAGGAGTGTAGTCGCCTGTGTCAAGGAGAGCGTAAAAGGAAGATCCTGTGCAGTCGTGAGTCAGACCGTGTGGTGGTTTCAGACCAGAGATGCCATGGCTCGCCTCGACCTGCTGCCATCACAGAACAGTGCAACACAGACTGTGAACTCAGGTGGCACATCGCCCGCAAGAGTGAGTGTACAGCTATCTGTGGAATTGGCTACCGCACCCTGGAAATCTACTGTGCCAAAAACAGTCGATCCGACAGCAAAACACAGAAGGTCGACGACCGATACTGCAGCAACCAGCGCAAGCCTGACGACAAGGAGGTTTGCCACGGAGACTGCAGCCCTGGAGGCTGGGAGTATTCTCCCTGGTCAGAGTGCTCTAAAAGCTGGGGTGGAACGCAACGCCGGAGCGCGGTATGTGGAAAGTCAGCGGAGAGAAATGCCGATGAGAGCAAGTGCAACTCCAGAGACAAGCTCACCGTCCAGCCCTGCAACGAGTTTCTGTGTCCACAGTGGAAGACTGGGGAATGGTCAGAGTGCCTGGTGACTTGCGGAAAAGGATACAAGCATCGACAGACGTGGTGTCAGTTTGGAGAGGACCGACTGGACGACCGTTTCTGTGACTCGTCTAAACCGGAGTCGGTGCAGGCATGCCAGCAGCAGGAGTGTGCATCCTGGCAGGTCGGCCCGTGGGGACAGtgtacCACCTCATGTGGCCCCGGCTATCAGCTGAGAGCAGTGAAGTGTGTGGTGGGTTCATATGGCGCCGTCATGGATGACACAGAATGCAATGCTGCTACACGACCGACTCACACACAGGACTGTGAGATCTCTCAATGTCCCATCACCCATCCTGTTTCTCCAGAGACAAAAATGGTGCCTCACCCCGGTCATAAAACTCAGTGGCGCTATGGCTCTTGGACTCAGTGTAGCGCCACCTGTGGGAAGGGCACGCGCATGCGCTATGTCAGTTGTCGTGACAACCAGGGTGGCGTGGCGGAGGACTCGTCCTGTGCTCACCTGCCCAAACCCCCAGCCCGAGAGGTGTGCTCTGTGGGGGCCTGCGGTCAGTGGAAGGCCTTAGAGTGGAGTCAGtGCTCTGTTTCTTGCGGTCAGGGCAAGGCCACTCGGCAGGTGCTGTGCGTGAACTTCAGTGACCAGGACCAGGTGGTGGATATGAGCGAGTGTGACCCCGACGATCGCCCTGCGACGGAGCAGGAGTGTAACATGGCCCAGTGTCCGTCTCGCTCCAGTGACCACGGGGGCTTCCCACCCAACTCAGACGCCCGAAAAAGAACCCCGTCCTCTGGCAGAGCCGACCGGATCCGAGGAGGGCGCTCACACCAGTGGAGGACTGGACCATGGGGAGCGTGCTCGAGCACATGTGCCGGGGGATTCCAGAGGCGTGTGGTCGTTTGCCAGGATGAGAACGGCTATCCTGCTAACAGCTGTGATGAGAGCATGCAGCCCAACGAGCAGCGCTCCTGCGAGTCCGGACCCTGCCCACAGTGGGTCTACGGCAACTGGGGCGAGtgttCGAAGCCCTGTGGTGGGGGAATAAAGACGCGGCTGGTGGCTTGTCAGCGGCCCAACGGGGAGCGTTTTAACGACCTGAGCTGTGAAATTTTTGTCAAACCGTCGGACCAAGAACAGTGCAACACGCAGTCCTGCTCGGCCAATCCGCACTGGAGCACGGACCCGTGGAGCTCGTGCTCCGCCTCCTGCGGGAGGGGCTACCGGTACCGTAACGTGACCTGCGTCGGCCGCTCCGGGCGGCCAATCGCGGAGGAGAACTGCCGCCACGTGTCCCGCCCCCAGAAGCAGAGGAGGTGCAGAGGAGGCCGCTGTCCCAAGTGGAAGACGAGTGCCTGGGGAGAGTGTTCGGCCTCGTGTGGCGCCGGGGAGCAGCGGAGAGAGGTGTTCTGTCAGATCGGGGATCAGCGCCGGGTGCCGGACTCAGAGTGCTCCCACCTCCCCCGCCCACCGTCCACCCAAACCTGCAGCCGGGAGGAGTGTCCCGCACGCTACAGATGGAGTCAGACTGAGTGGCAAACGTGTAGCAAAACATGCGGCTCTGGAGGCCGTCACCGGACAGTGGTGTGTTTAGATCACAACGAGCACGAGGTTCACGAGATGTACTGCTCAGACCAGGGAAGACCAGGAGACAACGAACCGTGCAACACTCAACCCTGCGAGTTCATCTGGATCACTGGAGACTGGACTGAGTGCTCGGTCACCTGTGGACAGGGCTATCGGCGGAGGCTGGTGTCCTGCAGTGAAGTGCATGCTGGCGTAGAGAATTACGAGTACGGTCACCAGGCGTCATCCAACTGCCCTGGGACCCCTCCTGAGAGCTACATGGCCTGCAACCTGCCCTCGTGCCCCTCTGGCCACACCTGGAGAGTGGGCATCTGGGGACCTTGCTCCGTGAGCTGTGGCGAGGGCTGGATGGAGCgctcagtgcagtgtgtttcaGCAGATGGGGAACTCAGTGATGAATGTCCCTCCACCTCCAGGCCGGAGGGTCGTAAGCCTTGCAGTAACCCTTCCTGTCATCTTGCCTCCAGCTGCAGGGATGTGCAGCTCCAGACTGGTGTCGTGACGGACGGAGAGCAGGTTCTGAGTGTCCAGGGAAAAGCGCTTAAAATCTATTGTTCTGAGATGGACACAGACAGTCCAAAAGAATACATCACTCTTACGACCGGGGAGCATGAGAACTTCTCCGAGGTTTTTGGATTCAGGCTGATGGACCCCACCCAGTGCCCAACCAACCTGAGCAGAAGAGAAGACTGCCATTGTCGGAGAGATTACACAGCTGCTGGCCTGTCCACTTTCACCCGGGTCAGACTGGACCTCAGCAAGATGACCATCATCACGACAGACTGGACGTACGCCTTCACTCACGAGGGTCACAAGGTACCTTTCGCCACTGCGGGAGACTGCTACAGCGCTGCCCGATGTCCACAGGGTCGGTTCAGGATCAATCTCTCAGGAACGGGATTTCAGGTGGCTGAGAGCACAAAGTGGATCTCTCAAGGGAACTACGCGGTGGCCGACATCCACAAGTCTGTGGATGGCAGCAGAGTAACAGGAACGTGTGGTGGCTATTGTGGAAAATGCACTCCGTCCTCTGGCTCCGGCCTTCTCGTCCAAGTCACATGAACCACATAAGTATAAGGTTTCTTCAGGACTTTCCTggcgtttctctctctcagtggtgCTAAAGGCAGTGAAGAACAGTGAAGAACCCcaacccaccccc

Function

GO: NA

KEGG:

id description
K08624 ADAMTS9; a disintegrin and metalloproteinase with thrombospondin motifs 9

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU263433 lncRNA downstream 15836 32081508 ~ 32083630 (-) True G194142
TU263444 lncRNA downstream 18095 32081015 ~ 32081371 (-) True G194153
TU263390 lncRNA downstream 197394 31901808 ~ 31902072 (-) True G194105
XR_002651582.1 lncRNA downstream 199476 31894502 ~ 31899990 (-) True LOC111195341
TU263404 lncRNA downstream 201082 31897591 ~ 31898384 (-) False LOC111195341
TU263567 lncRNA upstream 133565 32330326 ~ 32334659 (-) True G194234
TU263578 lncRNA upstream 285170 32481931 ~ 32482201 (-) True G194244
XM_007256437.3 mRNA downstream 18754 31929726 ~ 32080712 (-) False prickle2
XM_022682810.1 mRNA downstream 64092 31929726 ~ 32035374 (-) False prickle2
XM_022682811.1 mRNA downstream 82857 31929726 ~ 32016609 (-) False prickle2
XM_007256438.3 mRNA downstream 129528 31929726 ~ 31969938 (-) True prickle2
XM_022682808.1 mRNA downstream 191661 31904235 ~ 31907805 (-) True LOC111195428
XM_007256431.3 mRNA upstream 83041 32279802 ~ 32481483 (-) True magi1
XM_022682817.1 mRNA upstream 83041 32279802 ~ 32481482 (-) False magi1
XM_022682814.1 mRNA upstream 83041 32279802 ~ 32481482 (-) False magi1
XM_022682815.1 mRNA upstream 83041 32279802 ~ 32481482 (-) False magi1
XM_022682816.1 mRNA upstream 83041 32279802 ~ 32481482 (-) False magi1
trnae-cuc_20 other downstream 924588 31174807 ~ 31174878 (-) True trnae-cuc_20
TU263184 other downstream 926997 31170339 ~ 31172469 (-) False LOC103037496
TU263040 other downstream 1268520 30809794 ~ 30830946 (-) True spcs1
TU263041 other downstream 1268520 30809794 ~ 30830946 (-) False spcs1
TU262902 other downstream 1919340 30165761 ~ 30180126 (-) True G193737

Expression Profile