RNA id: TU351481


Basic Information

Item Value
RNA id TU351481
length 442
lncRNA type inter_gene
GC content 0.55
exon number 1
gene id G256819
representative True

Chromosome Information

Item Value
chromosome id NW_019171597.1
NCBI id APWO02001195.1
chromosome length 221831
location 44439 ~ 44880 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

tttcccatttttctccccaatttacacggccaattacccaacccactcattaggactccccctatcactagtgatgccccaacacaccaggagggtgaagactaacacatgcttcctctgatacatgtgaagtcagacaccgcttcttttcgagctgctgctgatgcagcattgccgagcagccagcgcgcttggaggaaagcacagcggtaCATcagctccggtacatcagctcacagacgccctgtgctgcagacatcaccataggagtgatgtggggagagagcaccatctacccacccggagggagcagggccaattgtgctccctctgaacaccggcagcttgatggtaaagctgcatgagcgggggttcaaacctgcgacctcctgctcatagtggcagcgccttagaccgctggaccaatCGGCGCCCAtctaaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU351476 lncRNA upstream 23464 20630 ~ 20975 (+) True G256816
TU351484 lncRNA downstream 496 45376 ~ 55724 (+) True G256822
TU351527 lncRNA downstream 90151 135031 ~ 137329 (+) True G256835
TU351573 lncRNA downstream 133866 178746 ~ 180396 (+) False G256865
TU351574 lncRNA downstream 133866 178746 ~ 179612 (+) True G256865
XM_022662364.1 mRNA downstream 17430 62310 ~ 68356 (+) True LOC107197357
XM_015604109.2 mRNA downstream 17432 62312 ~ 68356 (+) False LOC107197357
XM_022662351.1 mRNA downstream 48189 93069 ~ 100829 (+) True LOC103046842
XM_022662352.1 mRNA downstream 62793 107673 ~ 114556 (+) True LOC111188544
XM_022662353.1 mRNA downstream 67529 112409 ~ 130974 (+) False LOC107197265
TU351570 other downstream 124821 169701 ~ 170409 (+) True G256864
TU351575 other downstream 134249 179129 ~ 181336 (+) False G256865

Expression Profile