RNA id: TU351570


Basic Information

Item Value
RNA id TU351570
length 583
RNA type TUCP
GC content 0.60
exon number 2
gene id G256864
representative True

Chromosome Information

Item Value
chromosome id NW_019171597.1
NCBI id APWO02001195.1
chromosome length 221831
location 169701 ~ 170409 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

gggcgATGGTTTTTCCATGTGCTTGGTGAGATGAATGAAGACACGCTGtggaaaacgagagagagaagcagctcCGCTCCCAGCTGAGACTCCGGCTTCCTGCCGCTCATCTGCTGCTGCACCGTCAGACCCTGCAGCTACTGCACCGTCAGACCCTGCAGCTACTGCACCGTCAGACCCTGCAGCTACTGCACCGTCAGACCCTGCAGCTACCGCACCGTCAGACCCAACAACTATTGCACCGTCAGACCCAACAACTATTGCACCATCAGACCCTGCAGCTACTGCACAGTCAGACCCTGCAGCTACTGCACCGTCAGACCCTGCAGCTACTGCACCGTCAGACCCTGCAGCTACTGCACCGTCAGACCCTGCAGCTACTGCACCGTCAGACCCTGCAGCTACCGCACCGTCAGACCCAACAACTATTGCACCATCAGACCCTGCAGCTACTGCACAGTCAGACCCTGCAGCTACCGCACCGTCAGACCCTGCAGCTACCGCACAGTCAGACCCTGCAGCTACCGCACAGTCAGACCCTGCAGCTACCGCACAGTCAGACCCTGCAGCTACCGCACAGTCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU351527 lncRNA upstream 32372 135031 ~ 137329 (+) True G256835
TU351484 lncRNA upstream 113977 45376 ~ 55724 (+) True G256822
TU351481 lncRNA upstream 124821 44439 ~ 44880 (+) True G256819
TU351476 lncRNA upstream 148726 20630 ~ 20975 (+) True G256816
TU351573 lncRNA downstream 8337 178746 ~ 180396 (+) False G256865
TU351574 lncRNA downstream 8337 178746 ~ 179612 (+) True G256865
XM_022662353.1 mRNA upstream 38727 112409 ~ 130974 (+) False LOC107197265
XM_022662358.1 mRNA upstream 38727 112409 ~ 130974 (+) False LOC107197265
XM_022662360.1 mRNA upstream 38727 112409 ~ 130974 (+) True LOC107197265
XM_022662362.1 mRNA upstream 38727 112409 ~ 130974 (+) False LOC107197265
XM_022662355.1 mRNA upstream 38727 112409 ~ 130974 (+) False LOC107197265
TU351575 other downstream 8720 179129 ~ 181336 (+) False G256865

Expression Profile