RNA id: XM_022662352.1


Basic Information

Item Value
RNA id XM_022662352.1
length 641
RNA type mRNA
GC content 0.49
exon number 10
gene id LOC111188544
representative True

Chromosome Information

Item Value
chromosome id NW_019171597.1
NCBI id APWO02001195.1
chromosome length 221831
location 107673 ~ 114556 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

GTGGGAGTAGCTCCTCTGCTAGGGGCTGGGGTTAGAATTAAAGTCCTGCCCCTTACCAAGATGGGGGGCTGGGAgagtataaaacaaatattgctGCCCACTGAAGCATAGGGAAGTCAAAATCCTGAGTGCTACCTGCTCTATGTCTGTTCTTGAGTTTCCCACTTAGACCTGTACAAAAGATGATGTCACGAAATCTTATAATTGCCTCGGTAGCAGTTGTCATCCTGGCAACAACAGTTTCAACTGCTCCAGTTGAAGACAAAGAACCCGAGGAGAATGACTTTGAAGCagaggagggtgaagaagagCTCTCAGAGGAAGAAGACGATGATGATGACTCCAAAGGTCAACATATGAAGGGAGCCGGAGCCCAGCAAGCCACAGTGGTGCCCAAAGGCCCAGGTCAGAAACTGAATGGAGAAGGCGCTGCACAAGCAAGCTTTGGCTCATCCAGTGGTtcctcagcagcagcatcatcagcagcagtagaTGATATTAATGGAAACAATGGAAAAGACACCCAAGCCTTGCCCTCTGGCTCAAGTTCTCACGATTCAAGTGTGTCTGGACACGGTGGGTCCACATCAGGAGCAGTACCTGCAGttGATGTTCTTGATGATCCAAAGAGACTTAAATGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU351484 lncRNA upstream 51949 45376 ~ 55724 (+) True G256822
TU351481 lncRNA upstream 62793 44439 ~ 44880 (+) True G256819
TU351476 lncRNA upstream 86698 20630 ~ 20975 (+) True G256816
TU351527 lncRNA downstream 20475 135031 ~ 137329 (+) True G256835
TU351573 lncRNA downstream 64190 178746 ~ 180396 (+) False G256865
TU351574 lncRNA downstream 64190 178746 ~ 179612 (+) True G256865
XM_022662351.1 mRNA upstream 6844 93069 ~ 100829 (+) True LOC103046842
XM_022662364.1 mRNA upstream 39317 62310 ~ 68356 (+) True LOC107197357
XM_007241041.3 mRNA downstream 45387 159943 ~ 216441 (+) True LOC103046535
TU351570 other downstream 55145 169701 ~ 170409 (+) True G256864
TU351575 other downstream 64573 179129 ~ 181336 (+) False G256865

Expression Profile