RNA id: trnad-guc_31


Basic Information

Item Value
RNA id trnad-guc_31
length 72
RNA type tRNA
GC content 0.60
exon number 1
gene id trnad-guc_31
representative True

Chromosome Information

Item Value
chromosome id NW_019171985.1
NCBI id APWO02001583.1
chromosome length 114847
location 98713 ~ 98784 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTCCCCGACGGGGAg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU366216 lncRNA upstream 3321 94661 ~ 95392 (+) False LOC103023347
TU366219 lncRNA upstream 22831 75119 ~ 75882 (+) True G267485
TU366208 lncRNA upstream 50178 48120 ~ 48535 (+) True G267479
TU366206 lncRNA upstream 53672 44269 ~ 45041 (+) True G267478
TU366204 lncRNA upstream 57734 38834 ~ 40979 (+) True G267476
XM_022663108.1 mRNA upstream 3250 87126 ~ 95463 (+) False LOC103023347
XM_022663107.1 mRNA upstream 3251 90442 ~ 95462 (+) False LOC103023347
XM_022663111.1 mRNA upstream 15896 59992 ~ 82817 (+) False LOC103023347
XM_022663110.1 mRNA upstream 15896 68601 ~ 82817 (+) True LOC103023347
XM_022663109.1 mRNA upstream 24886 59975 ~ 73827 (+) False LOC103023347
trnai-aau_15 other upstream 502 98138 ~ 98211 (+) True trnai-aau_15
trnav-uac_5 other upstream 829 97812 ~ 97884 (+) True trnav-uac_5
trnad-guc_30 other upstream 1173 97469 ~ 97540 (+) True trnad-guc_30
TU366203 other upstream 60107 33256 ~ 38606 (+) False LOC111189404
trnav-uac_6 other downstream 272 99056 ~ 99128 (+) True trnav-uac_6
trnai-aau_16 other downstream 598 99382 ~ 99455 (+) True trnai-aau_16
trnad-guc_32 other downstream 1173 99957 ~ 100028 (+) True trnad-guc_32
trnav-uac_7 other downstream 1516 100300 ~ 100372 (+) True trnav-uac_7
trnai-aau_17 other downstream 1842 100626 ~ 100699 (+) True trnai-aau_17