RNA id: trnad-guc_39


Basic Information

Item Value
RNA id trnad-guc_39
length 72
RNA type tRNA
GC content 0.60
exon number 1
gene id trnad-guc_39
representative True

Chromosome Information

Item Value
chromosome id NW_019171985.1
NCBI id APWO02001583.1
chromosome length 114847
location 108661 ~ 108732 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTCCCCGACGGGGAg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU366216 lncRNA upstream 13269 94661 ~ 95392 (+) False LOC103023347
TU366219 lncRNA upstream 32779 75119 ~ 75882 (+) True G267485
TU366208 lncRNA upstream 60126 48120 ~ 48535 (+) True G267479
TU366206 lncRNA upstream 63620 44269 ~ 45041 (+) True G267478
TU366204 lncRNA upstream 67682 38834 ~ 40979 (+) True G267476
XM_022663108.1 mRNA upstream 13198 87126 ~ 95463 (+) False LOC103023347
XM_022663107.1 mRNA upstream 13199 90442 ~ 95462 (+) False LOC103023347
XM_022663111.1 mRNA upstream 25844 59992 ~ 82817 (+) False LOC103023347
XM_022663110.1 mRNA upstream 25844 68601 ~ 82817 (+) True LOC103023347
XM_022663109.1 mRNA upstream 34834 59975 ~ 73827 (+) False LOC103023347
trnai-aau_23 other upstream 502 108086 ~ 108159 (+) True trnai-aau_23
trnav-uac_13 other upstream 829 107760 ~ 107832 (+) True trnav-uac_13
trnad-guc_38 other upstream 1173 107417 ~ 107488 (+) True trnad-guc_38
trnai-aau_22 other upstream 1745 106843 ~ 106916 (+) True trnai-aau_22
trnav-uac_12 other upstream 2072 106517 ~ 106589 (+) True trnav-uac_12
trnav-uac_14 other downstream 272 109004 ~ 109076 (+) True trnav-uac_14
trnai-aau_24 other downstream 598 109330 ~ 109403 (+) True trnai-aau_24
trnad-guc_40 other downstream 1173 109905 ~ 109976 (+) True trnad-guc_40
trnav-uac_15 other downstream 1516 110248 ~ 110320 (+) True trnav-uac_15
trnai-aau_25 other downstream 1842 110574 ~ 110647 (+) True trnai-aau_25