RNA id: trnad-guc_43


Basic Information

Item Value
RNA id trnad-guc_43
length 72
RNA type tRNA
GC content 0.60
exon number 1
gene id trnad-guc_43
representative True

Chromosome Information

Item Value
chromosome id NW_019171985.1
NCBI id APWO02001583.1
chromosome length 114847
location 113637 ~ 113708 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTCCCCGACGGGGAg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU366216 lncRNA upstream 18245 94661 ~ 95392 (+) False LOC103023347
TU366219 lncRNA upstream 37755 75119 ~ 75882 (+) True G267485
TU366208 lncRNA upstream 65102 48120 ~ 48535 (+) True G267479
TU366206 lncRNA upstream 68596 44269 ~ 45041 (+) True G267478
TU366204 lncRNA upstream 72658 38834 ~ 40979 (+) True G267476
XM_022663108.1 mRNA upstream 18174 87126 ~ 95463 (+) False LOC103023347
XM_022663107.1 mRNA upstream 18175 90442 ~ 95462 (+) False LOC103023347
XM_022663111.1 mRNA upstream 30820 59992 ~ 82817 (+) False LOC103023347
XM_022663110.1 mRNA upstream 30820 68601 ~ 82817 (+) True LOC103023347
XM_022663109.1 mRNA upstream 39810 59975 ~ 73827 (+) False LOC103023347
trnai-aau_27 other upstream 502 113062 ~ 113135 (+) True trnai-aau_27
trnav-uac_17 other upstream 829 112736 ~ 112808 (+) True trnav-uac_17
trnad-guc_42 other upstream 1173 112393 ~ 112464 (+) True trnad-guc_42
trnai-aau_26 other upstream 1746 111818 ~ 111891 (+) True trnai-aau_26
trnav-uac_16 other upstream 2073 111492 ~ 111564 (+) True trnav-uac_16
trnav-uac_18 other downstream 272 113980 ~ 114052 (+) True trnav-uac_18
trnai-aau_28 other downstream 598 114306 ~ 114379 (+) True trnai-aau_28