RNA id: trnai-aau_15


Basic Information

Item Value
RNA id trnai-aau_15
length 74
RNA type tRNA
GC content 0.61
exon number 1
gene id trnai-aau_15
representative True

Chromosome Information

Item Value
chromosome id NW_019171985.1
NCBI id APWO02001583.1
chromosome length 114847
location 98138 ~ 98211 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

GGCCGGTTAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGTACGGGCCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU366216 lncRNA upstream 2746 94661 ~ 95392 (+) False LOC103023347
TU366219 lncRNA upstream 22256 75119 ~ 75882 (+) True G267485
TU366208 lncRNA upstream 49603 48120 ~ 48535 (+) True G267479
TU366206 lncRNA upstream 53097 44269 ~ 45041 (+) True G267478
TU366204 lncRNA upstream 57159 38834 ~ 40979 (+) True G267476
XM_022663108.1 mRNA upstream 2675 87126 ~ 95463 (+) False LOC103023347
XM_022663107.1 mRNA upstream 2676 90442 ~ 95462 (+) False LOC103023347
XM_022663111.1 mRNA upstream 15321 59992 ~ 82817 (+) False LOC103023347
XM_022663110.1 mRNA upstream 15321 68601 ~ 82817 (+) True LOC103023347
XM_022663109.1 mRNA upstream 24311 59975 ~ 73827 (+) False LOC103023347
trnav-uac_5 other upstream 254 97812 ~ 97884 (+) True trnav-uac_5
trnad-guc_30 other upstream 598 97469 ~ 97540 (+) True trnad-guc_30
TU366203 other upstream 59532 33256 ~ 38606 (+) False LOC111189404
trnad-guc_31 other downstream 502 98713 ~ 98784 (+) True trnad-guc_31
trnav-uac_6 other downstream 845 99056 ~ 99128 (+) True trnav-uac_6
trnai-aau_16 other downstream 1171 99382 ~ 99455 (+) True trnai-aau_16
trnad-guc_32 other downstream 1746 99957 ~ 100028 (+) True trnad-guc_32
trnav-uac_7 other downstream 2089 100300 ~ 100372 (+) True trnav-uac_7