RNA id: trnai-aau_18


Basic Information

Item Value
RNA id trnai-aau_18
length 74
RNA type tRNA
GC content 0.61
exon number 1
gene id trnai-aau_18
representative True

Chromosome Information

Item Value
chromosome id NW_019171985.1
NCBI id APWO02001583.1
chromosome length 114847
location 101870 ~ 101943 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

GGCCGGTTAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGTACGGGCCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU366216 lncRNA upstream 6478 94661 ~ 95392 (+) False LOC103023347
TU366219 lncRNA upstream 25988 75119 ~ 75882 (+) True G267485
TU366208 lncRNA upstream 53335 48120 ~ 48535 (+) True G267479
TU366206 lncRNA upstream 56829 44269 ~ 45041 (+) True G267478
TU366204 lncRNA upstream 60891 38834 ~ 40979 (+) True G267476
XM_022663108.1 mRNA upstream 6407 87126 ~ 95463 (+) False LOC103023347
XM_022663107.1 mRNA upstream 6408 90442 ~ 95462 (+) False LOC103023347
XM_022663111.1 mRNA upstream 19053 59992 ~ 82817 (+) False LOC103023347
XM_022663110.1 mRNA upstream 19053 68601 ~ 82817 (+) True LOC103023347
XM_022663109.1 mRNA upstream 28043 59975 ~ 73827 (+) False LOC103023347
trnav-uac_8 other upstream 254 101544 ~ 101616 (+) True trnav-uac_8
trnad-guc_33 other upstream 598 101201 ~ 101272 (+) True trnad-guc_33
trnai-aau_17 other upstream 1171 100626 ~ 100699 (+) True trnai-aau_17
trnav-uac_7 other upstream 1498 100300 ~ 100372 (+) True trnav-uac_7
trnad-guc_32 other upstream 1842 99957 ~ 100028 (+) True trnad-guc_32
trnad-guc_34 other downstream 502 102445 ~ 102516 (+) True trnad-guc_34
trnav-uac_9 other downstream 845 102788 ~ 102860 (+) True trnav-uac_9
trnai-aau_19 other downstream 1171 103114 ~ 103187 (+) True trnai-aau_19
trnad-guc_35 other downstream 1745 103688 ~ 103759 (+) True trnad-guc_35
trnav-uac_10 other downstream 2088 104031 ~ 104103 (+) True trnav-uac_10