RNA id: trnai-aau_20


Basic Information

Item Value
RNA id trnai-aau_20
length 74
RNA type tRNA
GC content 0.61
exon number 1
gene id trnai-aau_20
representative True

Chromosome Information

Item Value
chromosome id NW_019171985.1
NCBI id APWO02001583.1
chromosome length 114847
location 104357 ~ 104430 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

GGCCGGTTAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGTACGGGCCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU366216 lncRNA upstream 8965 94661 ~ 95392 (+) False LOC103023347
TU366219 lncRNA upstream 28475 75119 ~ 75882 (+) True G267485
TU366208 lncRNA upstream 55822 48120 ~ 48535 (+) True G267479
TU366206 lncRNA upstream 59316 44269 ~ 45041 (+) True G267478
TU366204 lncRNA upstream 63378 38834 ~ 40979 (+) True G267476
XM_022663108.1 mRNA upstream 8894 87126 ~ 95463 (+) False LOC103023347
XM_022663107.1 mRNA upstream 8895 90442 ~ 95462 (+) False LOC103023347
XM_022663111.1 mRNA upstream 21540 59992 ~ 82817 (+) False LOC103023347
XM_022663110.1 mRNA upstream 21540 68601 ~ 82817 (+) True LOC103023347
XM_022663109.1 mRNA upstream 30530 59975 ~ 73827 (+) False LOC103023347
trnav-uac_10 other upstream 254 104031 ~ 104103 (+) True trnav-uac_10
trnad-guc_35 other upstream 598 103688 ~ 103759 (+) True trnad-guc_35
trnai-aau_19 other upstream 1170 103114 ~ 103187 (+) True trnai-aau_19
trnav-uac_9 other upstream 1497 102788 ~ 102860 (+) True trnav-uac_9
trnad-guc_34 other upstream 1841 102445 ~ 102516 (+) True trnad-guc_34
trnad-guc_36 other downstream 501 104931 ~ 105002 (+) True trnad-guc_36
trnav-uac_11 other downstream 844 105274 ~ 105346 (+) True trnav-uac_11
trnai-aau_21 other downstream 1170 105600 ~ 105673 (+) True trnai-aau_21
trnad-guc_37 other downstream 1744 106174 ~ 106245 (+) True trnad-guc_37
trnav-uac_12 other downstream 2087 106517 ~ 106589 (+) True trnav-uac_12