RNA id: trnav-uac_11


Basic Information

Item Value
RNA id trnav-uac_11
length 73
RNA type tRNA
GC content 0.51
exon number 1
gene id trnav-uac_11
representative True

Chromosome Information

Item Value
chromosome id NW_019171985.1
NCBI id APWO02001583.1
chromosome length 114847
location 105274 ~ 105346 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

gtttctgtagtgtagtggtcATCACGTTCGCCTTACACGCGAAAGGTCCCTGGTTCGAAACCAGGCAGAAACA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU366216 lncRNA upstream 9882 94661 ~ 95392 (+) False LOC103023347
TU366219 lncRNA upstream 29392 75119 ~ 75882 (+) True G267485
TU366208 lncRNA upstream 56739 48120 ~ 48535 (+) True G267479
TU366206 lncRNA upstream 60233 44269 ~ 45041 (+) True G267478
TU366204 lncRNA upstream 64295 38834 ~ 40979 (+) True G267476
XM_022663108.1 mRNA upstream 9811 87126 ~ 95463 (+) False LOC103023347
XM_022663107.1 mRNA upstream 9812 90442 ~ 95462 (+) False LOC103023347
XM_022663111.1 mRNA upstream 22457 59992 ~ 82817 (+) False LOC103023347
XM_022663110.1 mRNA upstream 22457 68601 ~ 82817 (+) True LOC103023347
XM_022663109.1 mRNA upstream 31447 59975 ~ 73827 (+) False LOC103023347
trnad-guc_36 other upstream 272 104931 ~ 105002 (+) True trnad-guc_36
trnai-aau_20 other upstream 844 104357 ~ 104430 (+) True trnai-aau_20
trnav-uac_10 other upstream 1171 104031 ~ 104103 (+) True trnav-uac_10
trnad-guc_35 other upstream 1515 103688 ~ 103759 (+) True trnad-guc_35
trnai-aau_19 other upstream 2087 103114 ~ 103187 (+) True trnai-aau_19
trnai-aau_21 other downstream 254 105600 ~ 105673 (+) True trnai-aau_21
trnad-guc_37 other downstream 828 106174 ~ 106245 (+) True trnad-guc_37
trnav-uac_12 other downstream 1171 106517 ~ 106589 (+) True trnav-uac_12
trnai-aau_22 other downstream 1497 106843 ~ 106916 (+) True trnai-aau_22
trnad-guc_38 other downstream 2071 107417 ~ 107488 (+) True trnad-guc_38