RNA id: trnav-uac_16


Basic Information

Item Value
RNA id trnav-uac_16
length 73
RNA type tRNA
GC content 0.51
exon number 1
gene id trnav-uac_16
representative True

Chromosome Information

Item Value
chromosome id NW_019171985.1
NCBI id APWO02001583.1
chromosome length 114847
location 111492 ~ 111564 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

gtttctgtagtgtagtggtcATCACGTTCGCCTTACACGCGAAAGGTCCCTGGTTCGAAACCAGGCAGAAACA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU366216 lncRNA upstream 16100 94661 ~ 95392 (+) False LOC103023347
TU366219 lncRNA upstream 35610 75119 ~ 75882 (+) True G267485
TU366208 lncRNA upstream 62957 48120 ~ 48535 (+) True G267479
TU366206 lncRNA upstream 66451 44269 ~ 45041 (+) True G267478
TU366204 lncRNA upstream 70513 38834 ~ 40979 (+) True G267476
XM_022663108.1 mRNA upstream 16029 87126 ~ 95463 (+) False LOC103023347
XM_022663107.1 mRNA upstream 16030 90442 ~ 95462 (+) False LOC103023347
XM_022663111.1 mRNA upstream 28675 59992 ~ 82817 (+) False LOC103023347
XM_022663110.1 mRNA upstream 28675 68601 ~ 82817 (+) True LOC103023347
XM_022663109.1 mRNA upstream 37665 59975 ~ 73827 (+) False LOC103023347
trnad-guc_41 other upstream 272 111149 ~ 111220 (+) True trnad-guc_41
trnai-aau_25 other upstream 845 110574 ~ 110647 (+) True trnai-aau_25
trnav-uac_15 other upstream 1172 110248 ~ 110320 (+) True trnav-uac_15
trnad-guc_40 other upstream 1516 109905 ~ 109976 (+) True trnad-guc_40
trnai-aau_24 other upstream 2089 109330 ~ 109403 (+) True trnai-aau_24
trnai-aau_26 other downstream 254 111818 ~ 111891 (+) True trnai-aau_26
trnad-guc_42 other downstream 829 112393 ~ 112464 (+) True trnad-guc_42
trnav-uac_17 other downstream 1172 112736 ~ 112808 (+) True trnav-uac_17
trnai-aau_27 other downstream 1498 113062 ~ 113135 (+) True trnai-aau_27
trnad-guc_43 other downstream 2073 113637 ~ 113708 (+) True trnad-guc_43