RNA id: trnav-uac_5


Basic Information

Item Value
RNA id trnav-uac_5
length 73
RNA type tRNA
GC content 0.51
exon number 1
gene id trnav-uac_5
representative True

Chromosome Information

Item Value
chromosome id NW_019171985.1
NCBI id APWO02001583.1
chromosome length 114847
location 97812 ~ 97884 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

gtttctgtagtgtagtggtcATCACGTTCGCCTTACACGCGAAAGGTCCCTGGTTCGAAACCAGGCAGAAACA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU366216 lncRNA upstream 2420 94661 ~ 95392 (+) False LOC103023347
TU366219 lncRNA upstream 21930 75119 ~ 75882 (+) True G267485
TU366208 lncRNA upstream 49277 48120 ~ 48535 (+) True G267479
TU366206 lncRNA upstream 52771 44269 ~ 45041 (+) True G267478
TU366204 lncRNA upstream 56833 38834 ~ 40979 (+) True G267476
XM_022663108.1 mRNA upstream 2349 87126 ~ 95463 (+) False LOC103023347
XM_022663107.1 mRNA upstream 2350 90442 ~ 95462 (+) False LOC103023347
XM_022663111.1 mRNA upstream 14995 59992 ~ 82817 (+) False LOC103023347
XM_022663110.1 mRNA upstream 14995 68601 ~ 82817 (+) True LOC103023347
XM_022663109.1 mRNA upstream 23985 59975 ~ 73827 (+) False LOC103023347
trnad-guc_30 other upstream 272 97469 ~ 97540 (+) True trnad-guc_30
TU366203 other upstream 59206 33256 ~ 38606 (+) False LOC111189404
trnai-aau_15 other downstream 254 98138 ~ 98211 (+) True trnai-aau_15
trnad-guc_31 other downstream 829 98713 ~ 98784 (+) True trnad-guc_31
trnav-uac_6 other downstream 1172 99056 ~ 99128 (+) True trnav-uac_6
trnai-aau_16 other downstream 1498 99382 ~ 99455 (+) True trnai-aau_16
trnad-guc_32 other downstream 2073 99957 ~ 100028 (+) True trnad-guc_32

Expression Profile