RNA id: trnav-uac_9


Basic Information

Item Value
RNA id trnav-uac_9
length 73
RNA type tRNA
GC content 0.51
exon number 1
gene id trnav-uac_9
representative True

Chromosome Information

Item Value
chromosome id NW_019171985.1
NCBI id APWO02001583.1
chromosome length 114847
location 102788 ~ 102860 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

gtttctgtagtgtagtggtcATCACGTTCGCCTTACACGCGAAAGGTCCCTGGTTCGAAACCAGGCAGAAACA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU366216 lncRNA upstream 7396 94661 ~ 95392 (+) False LOC103023347
TU366219 lncRNA upstream 26906 75119 ~ 75882 (+) True G267485
TU366208 lncRNA upstream 54253 48120 ~ 48535 (+) True G267479
TU366206 lncRNA upstream 57747 44269 ~ 45041 (+) True G267478
TU366204 lncRNA upstream 61809 38834 ~ 40979 (+) True G267476
XM_022663108.1 mRNA upstream 7325 87126 ~ 95463 (+) False LOC103023347
XM_022663107.1 mRNA upstream 7326 90442 ~ 95462 (+) False LOC103023347
XM_022663111.1 mRNA upstream 19971 59992 ~ 82817 (+) False LOC103023347
XM_022663110.1 mRNA upstream 19971 68601 ~ 82817 (+) True LOC103023347
XM_022663109.1 mRNA upstream 28961 59975 ~ 73827 (+) False LOC103023347
trnad-guc_34 other upstream 272 102445 ~ 102516 (+) True trnad-guc_34
trnai-aau_18 other upstream 845 101870 ~ 101943 (+) True trnai-aau_18
trnav-uac_8 other upstream 1172 101544 ~ 101616 (+) True trnav-uac_8
trnad-guc_33 other upstream 1516 101201 ~ 101272 (+) True trnad-guc_33
trnai-aau_17 other upstream 2089 100626 ~ 100699 (+) True trnai-aau_17
trnai-aau_19 other downstream 254 103114 ~ 103187 (+) True trnai-aau_19
trnad-guc_35 other downstream 828 103688 ~ 103759 (+) True trnad-guc_35
trnav-uac_10 other downstream 1171 104031 ~ 104103 (+) True trnav-uac_10
trnai-aau_20 other downstream 1497 104357 ~ 104430 (+) True trnai-aau_20
trnad-guc_36 other downstream 2071 104931 ~ 105002 (+) True trnad-guc_36