RNA id: TU391692


Basic Information

Item Value
RNA id TU391692
length 456
lncRNA type intronic
GC content 0.52
exon number 2
gene id G285049
representative True

Chromosome Information

Item Value
chromosome id NW_019172608.1
NCBI id APWO02002206.1
chromosome length 232625
location 117555 ~ 118633 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

CTGGGTTCCTTCTGATGCAGGACagtgctagacctcatgtggctgaagtgtgtcagcagttcctgcatgaTGAAGGCATTGATGCTATGGACTGTCctgcccgttccccagacctgaatctaatccagcacatctgggacatcatgtctcgctccatccaccaacaccacactgatccatccaccaacaccacactgatccatccaccgacaccacactgatccatccaccaacaccacactgatccatccaccaacaccacactgatccatccaccaacaccaaactgatccatccaccaacaccacactgatccatccaccaacaccacactgatccatccaccgacaccacactgatccatccaccaacaccacactgatccatccaccaacaccaaactgatccatccaccaacaccacactgatccatccaccaacaccacactgataTAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU391689 lncRNA upstream 16837 89489 ~ 100718 (+) False LOC103033900
TU391679 lncRNA upstream 49671 65790 ~ 67884 (+) True G285043
TU391668 lncRNA upstream 72934 43647 ~ 44621 (+) True G285037
TU391696 lncRNA downstream 14138 132771 ~ 134753 (+) True G285052
XM_022664237.1 mRNA downstream 47505 166138 ~ 179793 (+) True LOC103034659
trnac-gca_11 other downstream 84077 202710 ~ 202781 (+) True trnac-gca_11
trnac-gca_12 other downstream 84527 203160 ~ 203231 (+) True trnac-gca_12
trnac-gca_13 other downstream 84806 203439 ~ 203510 (+) True trnac-gca_13
trnac-gca_14 other downstream 84914 203547 ~ 203618 (+) True trnac-gca_14
trnac-gca_15 other downstream 85022 203655 ~ 203726 (+) True trnac-gca_15

Expression Profile