RNA id: trnac-gca_18


Basic Information

Item Value
RNA id trnac-gca_18
length 72
RNA type tRNA
GC content 0.57
exon number 1
gene id trnac-gca_18
representative True

Chromosome Information

Item Value
chromosome id NW_019172608.1
NCBI id APWO02002206.1
chromosome length 232625
location 204150 ~ 204221 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

GGGGGTATAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGAGGTCCCCGGTTCAAATCCGGGTGCCCCCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU391696 lncRNA upstream 69397 132771 ~ 134753 (+) True G285052
TU391692 lncRNA upstream 85517 117555 ~ 118633 (+) True G285049
TU391689 lncRNA upstream 103432 89489 ~ 100718 (+) False LOC103033900
TU391679 lncRNA upstream 136266 65790 ~ 67884 (+) True G285043
TU391668 lncRNA upstream 159529 43647 ~ 44621 (+) True G285037
XM_022664237.1 mRNA upstream 24357 166138 ~ 179793 (+) True LOC103034659
XM_022664238.1 mRNA upstream 73057 89227 ~ 131093 (+) True LOC103033900
trnac-gca_17 other upstream 208 203871 ~ 203942 (+) True trnac-gca_17
trnac-gca_16 other upstream 316 203763 ~ 203834 (+) True trnac-gca_16
trnac-gca_15 other upstream 424 203655 ~ 203726 (+) True trnac-gca_15
trnac-gca_14 other upstream 532 203547 ~ 203618 (+) True trnac-gca_14
trnac-gca_13 other upstream 640 203439 ~ 203510 (+) True trnac-gca_13
trnac-gca_19 other downstream 379 204600 ~ 204671 (+) True trnac-gca_19
trnac-gca_20 other downstream 658 204879 ~ 204950 (+) True trnac-gca_20
trnac-gca_21 other downstream 11301 215522 ~ 215593 (+) True trnac-gca_21
trnac-aca other downstream 12335 216556 ~ 216627 (+) True trnac-aca
trnac-aca_1 other downstream 12492 216713 ~ 216784 (+) True trnac-aca_1