RNA id: trnar-ucu_18


Basic Information

Item Value
RNA id trnar-ucu_18
length 73
RNA type tRNA
GC content 0.53
exon number 2
gene id trnar-ucu_18
representative True

Chromosome Information

Item Value
chromosome id NW_019172695.1
NCBI id APWO02002293.1
chromosome length 373183
location 4274 ~ 4363 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

GGCTCTGTGGCGCAATGGATAGCGCATTGGACTTCTAATTcaaaggttgtgggttcgagtCCCACCAGAGTCG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU395337 lncRNA upstream 41267 45630 ~ 45862 (-) True G287603
TU395338 lncRNA upstream 49576 53939 ~ 54187 (-) True G287604
TU395357 lncRNA upstream 139821 144184 ~ 148507 (-) True G287616
TU395352 lncRNA upstream 140638 145001 ~ 145794 (-) True G287614
TU395359 lncRNA upstream 175069 179432 ~ 179704 (-) True G287618
XM_022664399.1 mRNA upstream 334461 338824 ~ 346491 (-) True LOC103039499
trnat-agu_22 other downstream 308 3893 ~ 3966 (-) True trnat-agu_22
trnar-ucu_17 other downstream 489 3696 ~ 3785 (-) True trnar-ucu_17
trnat-agu_21 other downstream 886 3315 ~ 3388 (-) True trnat-agu_21
trnar-ucu_16 other downstream 1066 3119 ~ 3208 (-) True trnar-ucu_16
trnat-agu_20 other downstream 1462 2739 ~ 2812 (-) True trnat-agu_20
trnat-agu_23 other upstream 107 4470 ~ 4543 (-) True trnat-agu_23
trnar-ucu_19 other upstream 488 4851 ~ 4940 (-) True trnar-ucu_19
trnat-agu_24 other upstream 684 5047 ~ 5120 (-) True trnat-agu_24
trnar-ucu_20 other upstream 1065 5428 ~ 5517 (-) True trnar-ucu_20
trnat-agu_25 other upstream 1262 5625 ~ 5698 (-) True trnat-agu_25